Gene Nwi_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0908 
Symbol 
ID3674352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp989901 
End bp991025 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content70% 
IMG OID637712457 
Productexonuclease SbcD 
Protein accessionYP_317522 
Protein GI75675101 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID[TIGR00619] exonuclease SbcD 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.153594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGTT TCATCCATTC GAGCGACCTG CATCTCGGCA AGCGCTTTGG CAACTTCTCC 
GGCGACCTGC CGAGCCGGCT GCGTGAGGCG CGGCATGCGG TGATCGGCCG GCTCGCGCAA
CATGCACGCG AGCAAAGCGC GGCCACGATC CTGCTCGCGG GCGATGTGTT CGATACCGAG
ACGCCCGCTT CGGATGTCCG CCGTCAGGCG CTGACCGAAA TGGCGCATCA CGCCCCGATC
CGATGGGTGA TCCTGCCCGG CAACCACGAT TCGCTGCAGG CGACGCAGCT CTGGACCACG
CTGGGAGCGG AAGCGCCCGA CAACATCATT CTCGCGGTGG AGCCACGCCC GATCGAACTG
GCGGCGGATG TCGTGCTCCT GCCCGCGCCC TGCACGACGC GCCGTCCCGG CCGCGATCTC
ACTGAATGGA TGGACAGCGA GGCGACGCCG GAAGGCACCA TCCGCCTCGG CCTCGCCCAC
GGCGCGATCC AGAGTTTTTC CGAGGAGGCG GTCGCGTCCG ACGTGATCGC GCCGGACCGG
GCCCGGCGCG CCGGCCTCGC CTATCTGGCG CTCGGCGACT GGCACGGCGC GATGGAGGTC
GGCCCGCGCA CCCGCTACAG CGGTACGCCC GAGCCGGACC GGTTCAAGCA TGACCATCCC
GGCGAAGCCT CGCTGGTCAG CATCGCCGGC CCCTCCGCCC TGCCCGAGGT GACGCCGCTG
GCCACGGCCG GCTTCGCCTG GCGCACGCTG AAACTGCATG TGCTCGACGG AGAAGATCCC
GCGTCGGCGC TGCAGGCGCT GTTGCCGGAG GCGCGGCTCC GCCGACAGAC ACTCGCGCGC
GTCATGGCGA CGGGCCGCAG CCGCCTGCCG GCACGCGCGG CGCTGACGCG CGCCATCGAA
AGCGCGACGC CGGATTTTTC CTTCCTGGAG CTTGACGAGG CTGGCCTTGT GACGGAATGC
GAGGTGGAAG ACCTCGACCG GATCGATCGC GCCGGAGCGC TTCGTGAAGC CGCGAACGCG
CTGCTGGCCG AAGCCGGAGA TGAAAGCCGT TCCGCCACCG AGCGCGAGAC CGCGCGCGCC
GCCCTCGCCC GTCTCTATTC CTATGCGCAG GTGGTCGCGT CATGA
 
Protein sequence
MFRFIHSSDL HLGKRFGNFS GDLPSRLREA RHAVIGRLAQ HAREQSAATI LLAGDVFDTE 
TPASDVRRQA LTEMAHHAPI RWVILPGNHD SLQATQLWTT LGAEAPDNII LAVEPRPIEL
AADVVLLPAP CTTRRPGRDL TEWMDSEATP EGTIRLGLAH GAIQSFSEEA VASDVIAPDR
ARRAGLAYLA LGDWHGAMEV GPRTRYSGTP EPDRFKHDHP GEASLVSIAG PSALPEVTPL
ATAGFAWRTL KLHVLDGEDP ASALQALLPE ARLRRQTLAR VMATGRSRLP ARAALTRAIE
SATPDFSFLE LDEAGLVTEC EVEDLDRIDR AGALREAANA LLAEAGDESR SATERETARA
ALARLYSYAQ VVAS