Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0810 |
Symbol | |
ID | 3676031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 895490 |
End bp | 897334 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637712361 |
Product | phage terminase GpA |
Protein accession | YP_317427 |
Protein GI | 75675006 |
COG category | [R] General function prediction only |
COG ID | [COG5525] Bacteriophage tail assembly protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00486859 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGACG CCATCTCGAA GAACTCAGCC AAATCGGCAT CGAGCTTCGA TGAAGGCTTC GACGGACGCG CGGAGATCAT TACCGCCTGG AGCCGTGGCC TTGCGCCCGA TCCGGCTCTG ACGGTTTCGG CTTGGGCGGA TCGTTATCGC TTTCTGTCCT CGCGCGCTTC GTCCGAGGCG GGCCGCTATC GAACCGACCG GACGCCCTAT ATGCGCGGCG TCATGGATGC GCTCTCGCCC GGCAGTTCGG CCCGGCGGAT CGTGTTCATG AAAGCGGCGC AGGTCGGCGC GACCGAGGCC GGCAACAACT GGATCGGCTA TTGCATCCAT CAGGCGCCGG GTCCGTTCCT CGGCGTTCAG CCGACGACCG ATCTCGCCAA ACGCCTGTCA CAACAGCGCA TCGAGCCGCT GATCGATGAA AGCCCGGAAC TTCGGGCGCT GATCCTGCCG TCGCGCTCGC GCGATAGCGG CAACACGGTA CTCGCCAAGA AATTCGCAGG CGGGCAGCTT GTCTTGACCG GCGCCAACTC CGCCGTCGGC CTGCGCTCAA TGCCCGCGCG CTATGTCTTC CTCGACGAGG TGGACGCCTA TGAGGGCGAT GTCGATGGCG AAGGCGATCC GGTCGCGCTC GCCATCGCCC GCACGCGCAC CTTCGGCCAC CGCGCCAAGG TGTTTCTTGT CTCGACGCCG ACGATCAAGG GCCTGTCCCG GATCGAGCGG GAATTCGAAG CGAGCGATCA GCGCCGATTC TTCGTACCGT GCCCGCATTG CGGCCTCTCC CAATGGCTCA AGTTCGAACG CCTGAAATGG ACGAGCGGCG AACCGGCGAG CGCTGCCTAT CACTGCGAGG CTTGCGATCA GCCGATCGCC GAGCACCACA AGACCGCGAT GCTGTCGGCG GGCGAATGGC GCGCCACCGC CACTCCGGCC GACCCGCATT GCGTCGGCTT TCACATCTCC GGGCTCTATT CGCCGGTGGG CTGGCTTGGC TGGGCCGATA TCGCCCGCGA ATGGGAAGCG GCCCAGGGTG ATGATGCGGC GCTCAAAGCC GCAAAGAACA CGCTGCTCGG CGAGACGTGG CAGGAACGCG GCGAAGCACC GGATTGGCAG CGCCTCTACG AGCGGCGGGA AGATTTCGCA CCGCTGGTGC CAATGTGCGG CCTGATCCTC ACGGCAGGCG CCGACGTTCA GCACGACCGG ATCGAGGTCG ATATCTGGGC GTGGGGCCGA AGGCTCACCA GCGCGCTCGT CGAACACATC GTGCTCGAAG GCGACACTTC GCGCGAGGAG GTTTGGGGAA AGCTAACGGC GTTGCTCGGC CAGACGTGGC GTCACGAGAA CGGCGCGCGG ATGCGGATCG CGCGGCTTGC GATCGGCCGC ACGATCCGGC GTGGTGTGAA GCTCTGGAAG GTCTCGGTCG CAGTCTTCAA GTCGGAGACC TATCGCTTCC TGCGGCTTGA CCGCCCGACG GACGAAGAAC TCGCCGCAGA CACGCCGTTT CCGGACGGCT TCATGCACCT GCCGAAGAGC GTCACCGCCG AATGGGTGAA GCAGCTTGTC GCCGAGCAGC TGGTGACGGT GCGCGACCGC CGCGGCTTCT CCAAACTCGA ATGGCGGCAG ATGCGCGAGC GCAATGAGGC GCTGGATTGC CGGGTCTATG CCCGCGCCGC CGCATGGCTG CTCGGGATCG ACCGGTTCGA CGACGCCAAG TTCGAAGCGC TCGAAGAAGA GCTTCGGGTC GCAGCCGAGG ACGAAGCGCG GCCCGTCGAT CAGCGCGGCG TCACGCCCAC GACCGCGCCC GTGCGCCGCT CCGAATGGCT CGGGCGGCGC GACAAATGGT TCTAA
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Protein sequence | MSDAISKNSA KSASSFDEGF DGRAEIITAW SRGLAPDPAL TVSAWADRYR FLSSRASSEA GRYRTDRTPY MRGVMDALSP GSSARRIVFM KAAQVGATEA GNNWIGYCIH QAPGPFLGVQ PTTDLAKRLS QQRIEPLIDE SPELRALILP SRSRDSGNTV LAKKFAGGQL VLTGANSAVG LRSMPARYVF LDEVDAYEGD VDGEGDPVAL AIARTRTFGH RAKVFLVSTP TIKGLSRIER EFEASDQRRF FVPCPHCGLS QWLKFERLKW TSGEPASAAY HCEACDQPIA EHHKTAMLSA GEWRATATPA DPHCVGFHIS GLYSPVGWLG WADIAREWEA AQGDDAALKA AKNTLLGETW QERGEAPDWQ RLYERREDFA PLVPMCGLIL TAGADVQHDR IEVDIWAWGR RLTSALVEHI VLEGDTSREE VWGKLTALLG QTWRHENGAR MRIARLAIGR TIRRGVKLWK VSVAVFKSET YRFLRLDRPT DEELAADTPF PDGFMHLPKS VTAEWVKQLV AEQLVTVRDR RGFSKLEWRQ MRERNEALDC RVYARAAAWL LGIDRFDDAK FEALEEELRV AAEDEARPVD QRGVTPTTAP VRRSEWLGRR DKWF
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