Gene Nwi_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0702 
Symbol 
ID3674948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp784074 
End bp785183 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content68% 
IMG OID637712253 
ProductFMN-dependent alpha-hydroxy acid dehydrogenase 
Protein accessionYP_317320 
Protein GI75674899 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.494173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC CGCTTGCCAA GCTCACGCAG ATTCCGCCGA CGGTCGCGGC GGTTGCCGAC 
TACGAGGTGC TGGCGCGTGA GCGTGTGTCG CCTGGAGCCT GGGCCTATCT CGACGGCGGC
GCGGCGGACG AGGTGACCGC GCGGGAAAAT CGCGCGGCGT TCGCTCGTCT GCACTTGCGC
ACACGGGTTT TGCGCGATCT CTCCAGCGGA AACACGGCTT GCGAGTTGTT TGGCACGCGG
CTGCGTGCGC CGATCCTGCT CGCACCTGTC GCCTACCAGA AGCTCGCATA TCCGGATGGC
GAACTCGCCA CCGTGCTCGG CGCTTCGGCG ATGCGGATGG CGATGGTGGT CAGCACGCAG
GCGAGCGTCG CTCTGGAGGA GATCGCGCGG GAAGCGCAGA CGCCGCTGTG GTTTCAACTC
TACATCCAGC ACGACCGCGA CTTCACGCTT CGTCTCGTGC GCCGCGCGGA ATCCGCCGGC
ATTCGCGCGC TGGTGGTGAG CGTCGATGCG CCGATCAGCG GCCTGCGTAA CCGCGAGCAG
CGCATGGGCT TCGCTTTTCC GGGCGGCATC GAGCCGGTCA ATCTGCGCGG CCTGACGCCC
TCGCCGCGAG CCGCCGGCGA GACGCTGTTC GATAGTCCGC TGATAACCAG GGCCGCGACC
TGGCGCGACA TCGAGAATCT GCGCGAAGCG ACCAAGCTAC CGCTGGTGCT CAAGGGCATC
ATGACGGCGG AGGACGCCGA GCAGGCTCTT GCGGCCGGCG TCGATGGTCT CATCGTCTCC
AACCACGGAG GGCGGGTGCT TGATGGTCAA CCCGCGACCA TCGAGGTGCT TCCGGAGATC
GCGGCCGCCG TATCCGGCCG CGTACCGATC CTGCTCGACG GCGGGATCCG GCGCGGCGGC
GATGTCTTCA AGGCGCTGGC GCTCGGCGCC AGTGCGGTGC TGGTCGGCCG TGCCTTCGTT
CATGGGTTGG CCGCGGCGGG CGCGGTAGGC GTTGCCCATG TGCTGCGCAT CCTGCATGCC
GAGTTGGAAG CGACCATGGT GCTCACCGGC TGCCGGGATA TCCGTGCGAT TTCTCCGGCG
TCAATCCGGC AAGCAGGACT GCGTACGTAG
 
Protein sequence
MTTPLAKLTQ IPPTVAAVAD YEVLARERVS PGAWAYLDGG AADEVTAREN RAAFARLHLR 
TRVLRDLSSG NTACELFGTR LRAPILLAPV AYQKLAYPDG ELATVLGASA MRMAMVVSTQ
ASVALEEIAR EAQTPLWFQL YIQHDRDFTL RLVRRAESAG IRALVVSVDA PISGLRNREQ
RMGFAFPGGI EPVNLRGLTP SPRAAGETLF DSPLITRAAT WRDIENLREA TKLPLVLKGI
MTAEDAEQAL AAGVDGLIVS NHGGRVLDGQ PATIEVLPEI AAAVSGRVPI LLDGGIRRGG
DVFKALALGA SAVLVGRAFV HGLAAAGAVG VAHVLRILHA ELEATMVLTG CRDIRAISPA
SIRQAGLRT