Gene Nwi_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0601 
Symbol 
ID3676268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp679882 
End bp680574 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content61% 
IMG OID637712151 
Productflagellar hook capping protein 
Protein accessionYP_317220 
Protein GI75674799 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.366943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGT CAGTGGGTTC TGCGGTTCAG CAGGTGGTGT CCGGCGCAAC GGCGCAGCCT 
GCCTCCTCCG CCGCTTCATC GGCAACATCC AGCACCGGTA CGCTGGCCGG CAACTTCCAG
ACTTTTCTTA CGCTGCTGAC GACGCAATTG CAGAACCAGA ATCCGCTCGA CCCGCTGGAT
ACCAATCAGT TCACCCAACA ACTCGTCCAG TTCGCAGGCG TCGAGCAGCA ACTGAAGACC
AACGACCAGC TTTCGAACCT GGTCTCACTG CAGCAGACCA CGCAGGCCAC CCAGGCGCTC
GACTTCGTCG GCAAGAACGC CGTGATCGAC GGCGGCACCG CAACCATGGC CAACAATGCG
GTCACGTGGC ATCTCGGTAT TCCGACCGCC TCCACTCTCA CGATCAACAT CGCGAGCAGC
ACGGGCCAGA ATGTCTTCTC CGGTTCTTAC GGCGTCGATG CGGGCGACGA TCAGGCATTC
TCCTGGAACG GCCTCGGCAA TGACGGCACC CAATGGCCCG ACGGCCAATA CACGTTGACC
GCGACGGCTG TCGATGCGTC GGGAAACCCG GTCGGGGTCT CGACCCAGAT TAAAGGCCAG
GTCAATTCCG TCGATCTGAC CCAGTCACCT CCGTTGCTGT CGATCAGCGG CCAGACCTAC
ACCATCAACC AGATCAGGCG CATCGTGAAT TGA
 
Protein sequence
MTTSVGSAVQ QVVSGATAQP ASSAASSATS STGTLAGNFQ TFLTLLTTQL QNQNPLDPLD 
TNQFTQQLVQ FAGVEQQLKT NDQLSNLVSL QQTTQATQAL DFVGKNAVID GGTATMANNA
VTWHLGIPTA STLTINIASS TGQNVFSGSY GVDAGDDQAF SWNGLGNDGT QWPDGQYTLT
ATAVDASGNP VGVSTQIKGQ VNSVDLTQSP PLLSISGQTY TINQIRRIVN