Gene Nwi_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0520 
Symbol 
ID3675521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp577168 
End bp579834 
Gene Length2667 bp 
Protein Length888 aa 
Translation table11 
GC content63% 
IMG OID637712064 
ProductCheA kinase 
Protein accessionYP_317139 
Protein GI75674718 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.691832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATC TCCTCTGCGA ATTCCTGACC GAGACCAACG AGAGTCTGGA TACGGTCGAC 
AATCAGCTCG TCCGGTTCGA GCAGGATCCG AACAATGCGA AGATTTTGGA TAACATCTTC
CGGCTGGTCC ATACCATCAA GGGTACGTGC GGTTTTCTGG GCCTGCCGAG GCTAGAGGCG
CTCGCTCATG CGGCGGAGAC GCTGATGGGC AAGTTTCGCG ACGGCATGGC GGTGACCGGC
GAGGCCGTGA CGCTTATCCT GTCCACCATC GATCGCATCA AGGATATCCT GGGCCAGCTC
GAAGCGAGCG GGACGGAGCC GGAGGGAGCC GATGCCGATC TGATCGACGC GCTGCATCGC
ATGGCCGAGC GTGATCCATC CGGGCCGGCT TCCGACATCT CCGAAGCGAC GCCGGAATGT
GACATAGCGG GGACGCTCAC CTACCAGGTT CTCGAACGGC CTCTGCGCCC CGGCGAGGTG
TCGCTTGATG ATCTCGAGCG CGCGTTCCGC GAGACGGAGG TGGAGTCGAC CGCGCCCGCT
TCGCAGCCCG CGCCGGCAGC GCCGGTTGCT TCGAAGCCGG TCGCCACGGC TGCTCCGAAG
AAAGTGGAGG ATACTCCGGA AGGCGACCGG GTCGCCAACC AGTCGATTCG CGTCAACGTG
GATACGCTTG AGCACCTGAT GACGATGGTG TCCGAGCTCG TGCTGACGCG CAACCAGTTG
CTCGAGATCA GCCGCCGTCA CGAGGACACC GAATTCAAGG TGCCGCTGCA ACGGCTGTCC
AACGTCACCG CCGAGTTGCA GGAAGGGGTG ATGAAGACGC GGATGCAGCC GATCGGCAAT
GCCTGGCAGA AACTGCCGCG CATCGTGCGC GACCTTTCGA GCGAACTCGG CAAGCAGATC
GAACTCGAGA TGCATGGCGC CGACACCGAG CTCGACCGCC AGGTTCTCGA CCTCGTCAAG
GATCCGCTGA CCCACATGGT GCGGAATTCC GCCGATCATG GCCTGGAAAC ACCGGCGGAG
CGCATCAAGG CGGGAAAGCC GGAGCAGGGC ACCATCCGTC TCTCGGCATA TCATGAGGGC
GGCCACATCA TCATCTGCAT CGCCGACAAC GGCCGTGGGC TCGATACCGA GCGCATCAAG
GCAAAGGCAA TTCAGAACGG CCTGGCGACC GAAGCCGAAA TCGAGAGGAT GACCGAGGCG
CAGATTCACA AGTTCATCTT CGCTCCTGGC TTCTCGACCG CCGCGGCCGT GACCAGCGTC
TCCGGACGCG GCGTCGGCAT GGACGTGGTG CGGACCAATA TCGATCAGAT CGGCGGCACC
ATCGACATCA AGTCGGTGGC CGGCGAGGGT TCGAGCGTCA TCATCAAGAT TCCGCTGACG
CTGGCGATCG TGTCGGCTCT GATCGTCGAG GCCGCGGGTG ATCGCTTTGC GATACCGCAG
CTCTCGGTGG TCGAGCTGGT GCGCGCGCGC GCCAATTCGG AGCATCGTAT CGAGCGGATC
AGGGACACGC CGGTGCTGCG GCTGCGCAAC AAGCTTTTGC CGTTGATGCA CCTGAAGAGG
CTGCTGAAGA TCGATGACGG CGCGGACAGC GATCCCGAGA ACGGCTTCAT CGTGGTGACG
CAGGTCGGCA ACCAGACCTT CGGCATCGTG GTGGACGGCG TATTCCATAC CGAGGAAATC
GTGGTCAAGC CGATGTCGAC CATGCTGCGG CATATCGGCA TGTTCTCGGG CAACACCATC
CTGGGCGACG GCGCCGTGAT CATGATCATC GATCCGAACG GGATCGCCCA CGCGCTGGGC
GCATCGGTTG TGACCCAGCA GGAGATCGCC GATGAGAATG CCGCTCGCGC CGGCGCCGCC
GAACAGACGT CGCTTCTGGT GTTCCGCGCC GGCTCGGATC AGCCCAAGGC CGTGCCGCTC
GCGCTCGTCA CGCGACTTGA AGAGATCGCG GTCGCCAAGA TCGAGATCTC CGACGGCCGC
CATATGGTGC AGTATCGCGA GCAGCTCATG CCGCTGGTGC AGATGGATGG CGTTTCGATT
GGAACGGACG GGACGCAGCC GGTCCTGGTG TTCGCTGATG ATGGCCGGGC GGCGGGACTC
GTGGTCGATG AGATCATCGA CATCGTCGAG GAACGTCTGA ACATCGAGGT GGCGAGCAGC
AGGCCAGGCA TCCTCGGCTC TGCGATCATC AAGGGCCTGG CGACGGATGT GATCGACATC
GGTCATTTCC TGCCGATGGC CTTCTCCGAC TGGTTCAGGC GCAAGGAGAT GCGTGCGGCC
GCCACCGCGC GCTCGGTGCT GCTGGTGGAT GACAGCGCCT TCTTCCGCAA CATGCTCGCG
CCGGTCCTCA AGGCCGCGGG CTACCAGGTC AGGCTTGCGA CCAACGCGCA GGAAGGTCTT
CTCGCGCTGC GCTCGGGTCA GGAGTTCGAC GCGATCCTCA CGGACATCGA AATGCCGGAC
ATGAACGGAT TCGAGTTCGC GGAGACCGTG CGCTCCGATG ATCGATTGAG CGGAACTCCG
ATCATCGCGC TGTCGTCGAT GATTTCTCCG GCCGCGATCG AGCGGGGCCG TCAGGCTGGA
TTCCACGACT ACGTCGCCAA GTTCGACCGG CCTGGCCTGA TTGCCGCGCT GAAAGAGCAG
ACCGCCGAAA TTGGCCGGGC GGCATGA
 
Protein sequence
MDDLLCEFLT ETNESLDTVD NQLVRFEQDP NNAKILDNIF RLVHTIKGTC GFLGLPRLEA 
LAHAAETLMG KFRDGMAVTG EAVTLILSTI DRIKDILGQL EASGTEPEGA DADLIDALHR
MAERDPSGPA SDISEATPEC DIAGTLTYQV LERPLRPGEV SLDDLERAFR ETEVESTAPA
SQPAPAAPVA SKPVATAAPK KVEDTPEGDR VANQSIRVNV DTLEHLMTMV SELVLTRNQL
LEISRRHEDT EFKVPLQRLS NVTAELQEGV MKTRMQPIGN AWQKLPRIVR DLSSELGKQI
ELEMHGADTE LDRQVLDLVK DPLTHMVRNS ADHGLETPAE RIKAGKPEQG TIRLSAYHEG
GHIIICIADN GRGLDTERIK AKAIQNGLAT EAEIERMTEA QIHKFIFAPG FSTAAAVTSV
SGRGVGMDVV RTNIDQIGGT IDIKSVAGEG SSVIIKIPLT LAIVSALIVE AAGDRFAIPQ
LSVVELVRAR ANSEHRIERI RDTPVLRLRN KLLPLMHLKR LLKIDDGADS DPENGFIVVT
QVGNQTFGIV VDGVFHTEEI VVKPMSTMLR HIGMFSGNTI LGDGAVIMII DPNGIAHALG
ASVVTQQEIA DENAARAGAA EQTSLLVFRA GSDQPKAVPL ALVTRLEEIA VAKIEISDGR
HMVQYREQLM PLVQMDGVSI GTDGTQPVLV FADDGRAAGL VVDEIIDIVE ERLNIEVASS
RPGILGSAII KGLATDVIDI GHFLPMAFSD WFRRKEMRAA ATARSVLLVD DSAFFRNMLA
PVLKAAGYQV RLATNAQEGL LALRSGQEFD AILTDIEMPD MNGFEFAETV RSDDRLSGTP
IIALSSMISP AAIERGRQAG FHDYVAKFDR PGLIAALKEQ TAEIGRAA