| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0460 |
|---|
| Symbol | |
|---|
| ID | 3676702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 516855 |
|---|
| End bp | 517427 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637712002 |
|---|
| Product | carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_317079 |
|---|
| Protein GI | 75674658 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGTC TGCCCGTTCA TACCGCCGTC ACAGCTCCCG AAGCCGCAAG GGAACGAGTC
CAGAATGCCG AAAAGGCGAA CGGCTTCCTG CCCAACCTGA TCGGACTTCT GGCCAACGCG
CCGACCGCGC TGGAAACCTA TCAGACCGTG AGCGGCATCA ACGCGCGCGC CGGCCTGACG
CTGGCGGAAC GCGAAGCGGT GCAGATCACG GCGGCGATCA CTCATGGCTG CGGCTTCTGC
GTCGCCGGTC ACACCGCGAT CGCGTATAAA AAGGCCGACC TGAAGGACGC CGCCGTCAAC
GCGCTGCGCG ATGGCGTGCA CGGGCCGGAT GCGCGCCTCA ATGCCGTCGC CGACTTCACC
CGCGCCGTGA TCCGCAGCCG TGGCCGCGTC GAGGACGCCG AATTGAACGC GTTCCGCGCC
GCCGGCTTCA GCGACGCCAA CGCGCTGGAA GTGGTGCTCG GCGTCAGTCT CGCAACGCTG
TGCAACTTCG CCAACAATCT CGGGCAAACG GACATCAATC CGGAGCTCAA GCCTTACGCG
TGGAATAATC CGACCACCGT CGCCGCCGAG TGA
|
|---|
| Protein sequence | MTRLPVHTAV TAPEAARERV QNAEKANGFL PNLIGLLANA PTALETYQTV SGINARAGLT
LAEREAVQIT AAITHGCGFC VAGHTAIAYK KADLKDAAVN ALRDGVHGPD ARLNAVADFT
RAVIRSRGRV EDAELNAFRA AGFSDANALE VVLGVSLATL CNFANNLGQT DINPELKPYA
WNNPTTVAAE
|
|---|
| |