Gene Nwi_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0327 
Symbol 
ID3676156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp364797 
End bp366560 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content62% 
IMG OID637711867 
ProductABC transporter, transmembrane region 
Protein accessionYP_316946 
Protein GI75674525 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC TTTCGGAGTA CGCCAGTCGG CCCTTTGCAT TCGTGATGCG TTATTGCCGC 
CGGCGGTCAG CGTCGCACAT CGCGATCCTT TCATGCGTCG TCGCGGCGGT GGTGTGTTCA
GTCGGGACGC AGTACGGCGT CAAATCGCTG GTCGATGCGC TGACGCGCGG GCCCGGTCAT
AGCGGGGCGG TATGGCTGGC GTTCATCTTT CTCGTGACGC TGATCGCTGC CGACAACTTG
CTCTGGCGCG TCGCGAGCTG GGTCGCGAGC TTCACATTCG TCGGCGTCAC CGGCGACCTG
CGCCGCGATA TTTTCAGGCA TCTGACAGGT CATGCGCCGA GTTATTTCGC TAGACGGATG
CCGGGGATGT TGACGAGCCG CATCACGGCG ACCTCGAACG CGGTCCATAC CGTCGAGAAC
ATGCTGGTCT GGAATGTACT GCCGCCCTGT ATCGCGACGG TGGTTGCGAT TGCGCTGATC
GGTACGGTCA GTCTTCCGAT GGCGGCCGGG CTGGCGCTCG TCGCCGTCTT CATGGTCCTC
GTCATGTTCG GAGTGGCCGC CGGGGGGAAG ACCCTGCATG ACGATTACGC CGACAAGGCT
GCGATGGTTG ATGGCGAGAT GGTCGATGTC GTCAACAACA TGCCGCTGGT GAGGGCCTTC
TGCGGGACCG ACCATGAACT GGACAGGTTC AATGCCACGG TCGGCCGCGA AATGAGCGCG
CGCGGACGTA GTCTTCGTTA TCTGGAGAAG CTCAGGATCG CTCATGCCGT CATCACCATC
GTGCTGACCA TTTCGCTGCT GGCGTGGGCC ATTACGCTGT GGCAACGCGG TAGCGTCACC
ACCGGGGACG TCGTGCTGGT CTGCACGCTC GGCCTGTCGA TTCTGCACGC CACCAGAGAT
CTCGCCGTCG CGCTCGTGGA CGTCACCCAG CACGTGGCGC GGCTGTCGGA AGCCGTCGCG
ACGCTGCTGG TCCCGCACGA GCTGACCGAT CATCCCGAAG CCAGGCCGTT ACGAAAGAAC
GGCGCGGCCA TCGCCTTCAA CAATGTTTCG TTTCGATATC CGGGCGGCCG ATCCGTTTTC
GAGCGCTTCA ACCTCAGGAT ACAGCCGGGA CAGCGGGTCG GGCTGGTCGG AGAGTCCGGC
GGCGGCAAGT CGACGCTGTT CGTCCTGTTG CAGCGGTTCT ACGATGCGGA ACGCGGAAGC
GTGACAATCG ACAACCAGGA TATCTCGCGC GTGACGCAGC ACAGCCTGCG CGAGGCCATA
TCCGTGGTGC CGCAGGACAT TTCACTGTTT CACAGGACCA TTCTGGAGAA CATCCGTTAC
GGTCGTCCGA CGGCGACCGA CGACGAGGTG CTGCGCGCAG CCAGCGCCGC GCGTTGTGAT
TTCGTCGACA ATCTCCCCGA AGGATTCGCG ACCATGGTCG GCAACCGCGG CGTGAAGCTT
TCCGGAGGCC AGCGCCAGCG TATCGCTATC GCACGGGCTT TCCTCAAGGA TACGCCGATC
TTGCTGCTTG ACGAGGCCAC CGCAGCGTTG GACAGTGAGT CCGAGGAGGC AGTCCGCGAG
GCGCTCGGCA GCTTGATGCG AGGCCGTACA GTGATCGCGA TCGCGCACCG GCTTTCGACT
TTGCGCAGTT TCGATCGTGT GGTCGTGCTC AAGAACGGCA GAATCATCGA AGACGGCCAG
CCCGCTTGTC TGATGCGCAA AGATGGACAC TATCGAAACC TCGTCGCCAA GGAGATGAGC
CGCCTTGCTG TTCACGCGGC TTGA
 
Protein sequence
MDDLSEYASR PFAFVMRYCR RRSASHIAIL SCVVAAVVCS VGTQYGVKSL VDALTRGPGH 
SGAVWLAFIF LVTLIAADNL LWRVASWVAS FTFVGVTGDL RRDIFRHLTG HAPSYFARRM
PGMLTSRITA TSNAVHTVEN MLVWNVLPPC IATVVAIALI GTVSLPMAAG LALVAVFMVL
VMFGVAAGGK TLHDDYADKA AMVDGEMVDV VNNMPLVRAF CGTDHELDRF NATVGREMSA
RGRSLRYLEK LRIAHAVITI VLTISLLAWA ITLWQRGSVT TGDVVLVCTL GLSILHATRD
LAVALVDVTQ HVARLSEAVA TLLVPHELTD HPEARPLRKN GAAIAFNNVS FRYPGGRSVF
ERFNLRIQPG QRVGLVGESG GGKSTLFVLL QRFYDAERGS VTIDNQDISR VTQHSLREAI
SVVPQDISLF HRTILENIRY GRPTATDDEV LRAASAARCD FVDNLPEGFA TMVGNRGVKL
SGGQRQRIAI ARAFLKDTPI LLLDEATAAL DSESEEAVRE ALGSLMRGRT VIAIAHRLST
LRSFDRVVVL KNGRIIEDGQ PACLMRKDGH YRNLVAKEMS RLAVHAA