| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0295 |
|---|
| Symbol | |
|---|
| ID | 3677123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 335445 |
|---|
| End bp | 336317 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637711835 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_316914 |
|---|
| Protein GI | 75674493 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGTA CCATGCGTCG GCAGTCGTGT CTTGCAAGGC TTCTCGCATC CTCAACCGTA
ACCGCAATGC TGGCCATCGG ACTTGGCGGT TGTCAAACCG CTGCTATATC CGATGTCACA
GGCTCGCTCG GCGCCAAGGC CGAGACAAAG TCGGAAAAGC ATTCCGGAAC CGATCCGCAT
CGCACCGTCG AAGTCTATGG CGAGCGATTT CGGGCCAATC CGAAGGATGC CGACGCGGCC
CTGAGGTATG GATTGGCCTT GCGCGCGATC GGGCAGCGCG CCCAGGCGGT CGCGGTGCTG
GAACGCGCCG CGATCCTGAA TCCGGGCAAC AAGGTGGTGC TTGCCGGCTG GGGTCGGGCA
TTGGCCGAAA ACGGTCAGTC GCAGCAGGCG TTCGATGTGC TCAGCCGGGC GCATACACCG
GCGAGTCCGG ACTGGCGGAT TCTCTCGGTT CAGGGCACCA CGCTCGACAA GCTGGGCCGT
CACGATGATG CGCGCCGCTA TTACGCGAGC GCGCTCAGAA TCATGCCCGA CGAACCTTCG
GTGCTGTCCA ATCTCGGCAT GTCCTATGTC CTGACCAAGG AACTGCCCAA GGCCGAGGAG
ACGTTGCGTC GCGCTCACGC CGGCGCTCCC GTGGATAGCC GGATCCGGCA GAACCTGGCG
CTGGCCGTCG GGTTGCAGGG CCGGTTTGAC GAAGCCGAAA ATATCGTGAA GGCTGACCTG
CCGATCGACG AAGCCGCGGC GAACGTGGCT TACCTGAAGC AGATGCTGGG ACGCGGCGGC
GACGCGCGGG TCGGCGCGGC TGACAACGTC AGGCGGAACT CCCGCCGATC ACGAGCGGAT
AGCGATCCGC GGCCGGACCG GCCGGTCTCT TAG
|
|---|
| Protein sequence | MKSTMRRQSC LARLLASSTV TAMLAIGLGG CQTAAISDVT GSLGAKAETK SEKHSGTDPH
RTVEVYGERF RANPKDADAA LRYGLALRAI GQRAQAVAVL ERAAILNPGN KVVLAGWGRA
LAENGQSQQA FDVLSRAHTP ASPDWRILSV QGTTLDKLGR HDDARRYYAS ALRIMPDEPS
VLSNLGMSYV LTKELPKAEE TLRRAHAGAP VDSRIRQNLA LAVGLQGRFD EAENIVKADL
PIDEAAANVA YLKQMLGRGG DARVGAADNV RRNSRRSRAD SDPRPDRPVS
|
|---|
| |