Gene Nwi_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0253 
Symbol 
ID3674159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp282940 
End bp283542 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content55% 
IMG OID637711792 
Productferric siderophore receptor protein 
Protein accessionYP_316872 
Protein GI75674451 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.286193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCATCCCT ATTTAACCAA GCAAACGGAA GTTGGCGTAA AGTACGATTT TGGAACGTTC 
ATCGCCACGG CTGCCGTGTT CGAGTTTGAG AAGCAAAACA CCATAGTTGT TCCGGATGGG
TCAAGCGGCC CCGGTCGTCT GGCGATCGAC GGCAAACAGC GCCATCGCGG CGTTGAAATC
AGCTTCTTCG GCGAGCCCTA CGAGGGCGTC CGACTGCTGG GCGGCGTTAC CTATAGCGAC
GCCAGAATGA TCGCGACACA AGGTGGAACC CTTGATGGCA CATTTGTCAC CGGCGTTTCC
AGATGGCAGG GTAATCTTGG CGCAGAATGG GATACACCGT TCCTGGATGG TCTGACCTTC
ACAGGAAGAA TGATCGCGAC CGGATCACAA TATGCCAGCA CGAACAACAC ACTGAGAATG
CCGGGCTGGA CACGCTTCGA CGTCGGTGCC CGCTACACGA CGACGGCTCT CGGAAATCCG
CTCACCATTC GCGGAGGTAT CGAGAACGTA CTTGGTACGA AATATTGGTC TCAAGTATCC
GGTAGCATTT TCTCATTGGG AGCCCCGCGC ATATTCAAGT TGTCGGCGAC TATAGACTTC
TGA
 
Protein sequence
MHPYLTKQTE VGVKYDFGTF IATAAVFEFE KQNTIVVPDG SSGPGRLAID GKQRHRGVEI 
SFFGEPYEGV RLLGGVTYSD ARMIATQGGT LDGTFVTGVS RWQGNLGAEW DTPFLDGLTF
TGRMIATGSQ YASTNNTLRM PGWTRFDVGA RYTTTALGNP LTIRGGIENV LGTKYWSQVS
GSIFSLGAPR IFKLSATIDF