Gene Nwi_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0252 
Symbol 
ID3674158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp282177 
End bp282827 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content62% 
IMG OID637711791 
ProductLysR family transcriptional regulator 
Protein accessionYP_316871 
Protein GI75674450 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.682198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGC GCCACCTTCG TTATATCGTC GCCGCGGCCC GCAACGGCAG CTTCAGCGCG 
GCTGCGAACG AGTTCAACGC CAGGCAGCCG ATCGTCAGCA AGCGCATCAA GGAGGTTGAG
GACGAACTGG GCGTGCGCTT GTTCGAGCGT TCTACCGCCG GAGCGCGACT GACGTTGCTC
GGTGAGGATT TTGTCGTCGA TGCCCGTCGG GTTCTCGATG AGACGGAGCA TATGGCCCGG
CACGCGAAGG CCAGCCGTGC GGGGACGCTC GGGCACGTCG TCGTCGGGTT CTACAAATCG
CTATCGGCGG GAGCCTTCCG CGCGGCGGTG AGCTGCTTCC GAAAGCAAAA TCCGGATATC
GATATTGAAC TGGTCGAACT GCCTTTCGCA GACATTGCGG CGGGCGTGAT ATCCGGCGCT
CTTGATGCCG CGATCGTCCT CGGCGACGCC GGCAAATGCG CGATGTTCAA GACCATCGGG
CTTTGGTCCG AGCATCTCGT GATCGCGCTG CCGAAGGATC ATCCGCTCGC AGACAAGCCG
ATCGTCTACT GGCCGGATTT GAGAGGCGAG CGATTCCTCG TCACCGTTCG CGATCCTGGT
CCCGATACAC GATCAACGAG ACGGAGGAAT GCCGGACTGC CAGGGCGATA A
 
Protein sequence
MDLRHLRYIV AAARNGSFSA AANEFNARQP IVSKRIKEVE DELGVRLFER STAGARLTLL 
GEDFVVDARR VLDETEHMAR HAKASRAGTL GHVVVGFYKS LSAGAFRAAV SCFRKQNPDI
DIELVELPFA DIAAGVISGA LDAAIVLGDA GKCAMFKTIG LWSEHLVIAL PKDHPLADKP
IVYWPDLRGE RFLVTVRDPG PDTRSTRRRN AGLPGR