Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0252 |
Symbol | |
ID | 3674158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 282177 |
End bp | 282827 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637711791 |
Product | LysR family transcriptional regulator |
Protein accession | YP_316871 |
Protein GI | 75674450 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.682198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGC GCCACCTTCG TTATATCGTC GCCGCGGCCC GCAACGGCAG CTTCAGCGCG GCTGCGAACG AGTTCAACGC CAGGCAGCCG ATCGTCAGCA AGCGCATCAA GGAGGTTGAG GACGAACTGG GCGTGCGCTT GTTCGAGCGT TCTACCGCCG GAGCGCGACT GACGTTGCTC GGTGAGGATT TTGTCGTCGA TGCCCGTCGG GTTCTCGATG AGACGGAGCA TATGGCCCGG CACGCGAAGG CCAGCCGTGC GGGGACGCTC GGGCACGTCG TCGTCGGGTT CTACAAATCG CTATCGGCGG GAGCCTTCCG CGCGGCGGTG AGCTGCTTCC GAAAGCAAAA TCCGGATATC GATATTGAAC TGGTCGAACT GCCTTTCGCA GACATTGCGG CGGGCGTGAT ATCCGGCGCT CTTGATGCCG CGATCGTCCT CGGCGACGCC GGCAAATGCG CGATGTTCAA GACCATCGGG CTTTGGTCCG AGCATCTCGT GATCGCGCTG CCGAAGGATC ATCCGCTCGC AGACAAGCCG ATCGTCTACT GGCCGGATTT GAGAGGCGAG CGATTCCTCG TCACCGTTCG CGATCCTGGT CCCGATACAC GATCAACGAG ACGGAGGAAT GCCGGACTGC CAGGGCGATA A
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Protein sequence | MDLRHLRYIV AAARNGSFSA AANEFNARQP IVSKRIKEVE DELGVRLFER STAGARLTLL GEDFVVDARR VLDETEHMAR HAKASRAGTL GHVVVGFYKS LSAGAFRAAV SCFRKQNPDI DIELVELPFA DIAAGVISGA LDAAIVLGDA GKCAMFKTIG LWSEHLVIAL PKDHPLADKP IVYWPDLRGE RFLVTVRDPG PDTRSTRRRN AGLPGR
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