| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0206 |
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| Symbol | rpsA |
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| ID | 3676662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 236083 |
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| End bp | 237786 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637711744 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_316826 |
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| Protein GI | 75674405 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.49849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCGA CTGATACCCT CAATCCGTCC CGTGACGATT TCGCCGCGAT GCTCGATGAG
TCCTTCGCCG GTGGCAGCCT GCAGGAAAGC TCCGTCATCA AGGGCAAGGT GGTTGCGATC
GAGAAGGACA TGGCCGTCAT CGACGTCGGC CTCAAGACCG AAGGCCGCGT GGCGTTGCGT
GAATTCTCCG GTCCAGGTCG CGAGAGCACG CTGAAGGTCG GCGACGAGGT TGAGGTGTTC
CTTGATCGCA TCGAGAACGC GCTCGGCGAG GCCGTGCTGT CGCGCGACAA GGCGCGCCGC
GAGGAAAGTT GGGGCAAGCT CGAGAAAGCC TTCAACAACA ACGAGAAGGT GCACGGCGTC
ATCTTCAATC AGGTCAAGGG CGGCTTCACC GTCGATCTCG ACGGCGCCGT CGCCTTCCTG
CCGCGCTCGC AGGTGGACAT CCGTCCCATT CGCGATGTCG GTCCGCTGAT GAACAACACC
CAGCCGTTCC AGATTCTCAA GATGGATCGC CGCCGCGGCA ACATCGTCGT CTCCCGCCGC
ACGGTGCTGG AGGAGACCCG CGCCGAACAG CGGCAGGAGT TGGTCCAGAA CCTCGAAGAG
GGTCAGGTCA TCGACGGCGT GGTCAAGAAC ATCACCGACT ACGGCGCGTT CGTCGATCTC
GGAGGCATCG ACGGCCTGCT GCACGTTACC GATATCGCCT GGCGCCGCGT CAACCATCCG
ACCGAAGTGC TGGCGATCGG CCAGACCGTG AAGGTCAAGA TCATCAAGAT CAATCACGAG
ACCCACCGCA TCTCGCTCGG CATGAAGCAG TTGCTGGATG ATCCCTGGCA GGGCATCGAG
GCCAAGTATC CGCTGGGCGC CCGCTTCACC GGCCGCGTCA CCAACATCAC CGACTACGGC
GCGTTCGTGG AGCTTGAGCC GGGCATCGAG GGCCTTATCC ACGTCTCGGA AATGTCCTGG
ACCAAGAAGA ACATGCATCC GGGCAAGATC GTCTCGACCT CGCAGGAAGT CGAGGTGCAG
GTGCTCGAGG TCGACAGCGT CAAGCGCCGC ATCTCGCTCG GCCTCAAGCA GACCATGCGC
AATCCCTGGG AGGCGTTCAT CGAGAAGCAC CCGGTCGGTT CGACCGTGGA GGGCGAGGTC
AAGAACAAGA CCGAGTTCGG ACTGTTCCTG GGCCTGGAGG GCGATGTCGA CGGCATGGTC
CACCTTTCCG ACCTCGACTG GAAGCAGCCG GGCGAGCAGG TCATCGACAA TTTCAAGCGC
GGCGACATGG TCAAGGCCGT CGTGCTCGAC GTCGATGTCG AGAAGGAACG CATCTCGCTC
GGCGTCAAGC AGCTCGAGGG CGACCCGTTC GCCGAACCGG GCGACGTCAA GAAGGGCGCG
GTCGTCACCT GCGAGGTGCT CGAGGTCAAG GACGGAGGCA TCGAGGTGCA GATTTCCGGC
ACCGAGTTCC AGACCTTCAT CAAGCGTTCG GAACTGGCGA GGGACCGCAA CGATCAGCGC
ACCGAGCGTT TCGCCGTCGG CGAGAAGGTC GATGCCCGCG TCATCCAGTT CGACAAGAAG
GCCCGCAAGG TGCAGGTCTC GATCAAGGCG CTCGAAGTGG CCGAGGAGAA GGAAGCCATC
GCGCAGTACG GTTCTTCCGA CTCGGGCGCA ACGCTGGGCG ATATCCTCGG CACCGTGCTG
AAACAGCGCA CCGACAACAA GTAA
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| Protein sequence | MASTDTLNPS RDDFAAMLDE SFAGGSLQES SVIKGKVVAI EKDMAVIDVG LKTEGRVALR
EFSGPGREST LKVGDEVEVF LDRIENALGE AVLSRDKARR EESWGKLEKA FNNNEKVHGV
IFNQVKGGFT VDLDGAVAFL PRSQVDIRPI RDVGPLMNNT QPFQILKMDR RRGNIVVSRR
TVLEETRAEQ RQELVQNLEE GQVIDGVVKN ITDYGAFVDL GGIDGLLHVT DIAWRRVNHP
TEVLAIGQTV KVKIIKINHE THRISLGMKQ LLDDPWQGIE AKYPLGARFT GRVTNITDYG
AFVELEPGIE GLIHVSEMSW TKKNMHPGKI VSTSQEVEVQ VLEVDSVKRR ISLGLKQTMR
NPWEAFIEKH PVGSTVEGEV KNKTEFGLFL GLEGDVDGMV HLSDLDWKQP GEQVIDNFKR
GDMVKAVVLD VDVEKERISL GVKQLEGDPF AEPGDVKKGA VVTCEVLEVK DGGIEVQISG
TEFQTFIKRS ELARDRNDQR TERFAVGEKV DARVIQFDKK ARKVQVSIKA LEVAEEKEAI
AQYGSSDSGA TLGDILGTVL KQRTDNK
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