| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2725 |
|---|
| Symbol | |
|---|
| ID | 3672790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 2803248 |
|---|
| End bp | 2804756 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637711432 |
|---|
| Product | sodium:alanine symporter |
|---|
| Protein accession | YP_316483 |
|---|
| Protein GI | 74318743 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1115] Na+/alanine symporter |
|---|
| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.415567 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCCATT ATTTCTTCAT CGCAACGGCC GTGCTGTTTC CGCAGATCGC GCACGCAGCC
GAACCGGCCC GTGTCGACGC CTTCTTCGGT ACGCTCAACG GCTACCTCGC GAGTGTGATC
TTCTACGACG TCTTCCCGGG CGAGGCCGCC GTGCCTTTCA TCGTGGCCTG GCTCATTGTC
GGCGCGGTGT TCCTGACCTT GCGCTTCAGC TTCGTGAACC TGCGGATGAT GCGTCACGGC
TTCCGGATTC TGACCGGCAA GTACCACACC GCCGACGACC GCGGCGAGGT CAGTTCGTTT
CAGGCGCTGA CGACCGCGCT ATCGGCGACG GTCGGCCTCG GCAACATCGC CGGGGTCGCG
ATCGCGATCT CGATCGGCGG ACCGGGCGCG ACCTTCTGGA TGATCGTCGC CGGCTTTCTC
GGCATGACGA CCAAATTCAC CGAGGCGACG CTCGCGCAGC GCTACCGCGA AGTGCGCCCC
GACGGCCGCA TCATGGGCGG GCCGATGGAA TATCTGTCGA AGGGCTTCGC CGAGTTCAAT
CTGCCGCGGA CCGGCAAGTT GCTGGCCGCA GTGTTCGCCG TCTTCACCGT GCTCGGCTCC
TTCGGTGCGG GCAGTGCCTT TCAGGTCAGC CAGTCGCTCG GTGCGGTGCA GGAGCAACTG
CCGTTCTTCA ACGACGCGCC GATCGCCTAC GGCCTCATCG TCGCGTTCGC CGTGGGCGTC
GTCATCATCG GCGGCCTGCG TCGAATCGCG CACACGGCCG AAGCCGTCGT GCCGGCGATG
ATCCTGATCT ATCTCGCCGC CTGCCTGTGG ATCCTGATCA CCAATGCGGC GCAGATCCCG
GAAGCGCTGT CGAAGATCGT CACCGAGGCG TTCGCACCGA TCGCGGTCGC CGGCGGCATG
GTGGGCGTGC TCGTGCAGGG CTTCAAGCGC GCGGTGTTCT CGAGCGAAGC CGGCCTCGGC
TCGGCCGCGA TCGTGCACTC GACCGCGTCG GTCAAGTATC CGATCCGCCA GGGCATGGTC
GCGCTCTACG AGCCCTTCAT CGACACGATC ATCATCTGCA CGATGACCGC GCTCGTGATC
GTCATCACCG GCGTCTATAA CGATCCGTCG ACACTCGAAC TGCGCGAGGC GAGCAAGGGC
GCGGCGCTGA CCTCGGTCGC GTTCGGCACG GTGTCCGCCT GGTTCCCGAT CATCCTCACG
GTCTCGGTCG TGCTGTTTGC CTACAGCACG ATGATCTCCT GGTCCTACTA CGGCGAACGC
TGCTGGGCGT ATCTCTTCGG TGAGCGCACG TCGATCGTCT ACCGCGTCCT GTTTCTCGCC
TTCATCGTCG TCGCCTCGAT CGCGAGTGCC GGAAACATGG TCGACTTCAC CGATCTTCTG
GTGCTCGCGA TGGCGTTTCC CAACCTGCTC GGGCTCTATC TGCTGAGCGG CAAGGTGCGC
GCGATGCTGT CCGACTACCA GGCGCGGCTC AAAAGCGGCG AGCTCGACCG CGAGATCGCG
CCGCGCTGA
|
|---|
| Protein sequence | MFHYFFIATA VLFPQIAHAA EPARVDAFFG TLNGYLASVI FYDVFPGEAA VPFIVAWLIV
GAVFLTLRFS FVNLRMMRHG FRILTGKYHT ADDRGEVSSF QALTTALSAT VGLGNIAGVA
IAISIGGPGA TFWMIVAGFL GMTTKFTEAT LAQRYREVRP DGRIMGGPME YLSKGFAEFN
LPRTGKLLAA VFAVFTVLGS FGAGSAFQVS QSLGAVQEQL PFFNDAPIAY GLIVAFAVGV
VIIGGLRRIA HTAEAVVPAM ILIYLAACLW ILITNAAQIP EALSKIVTEA FAPIAVAGGM
VGVLVQGFKR AVFSSEAGLG SAAIVHSTAS VKYPIRQGMV ALYEPFIDTI IICTMTALVI
VITGVYNDPS TLELREASKG AALTSVAFGT VSAWFPIILT VSVVLFAYST MISWSYYGER
CWAYLFGERT SIVYRVLFLA FIVVASIASA GNMVDFTDLL VLAMAFPNLL GLYLLSGKVR
AMLSDYQARL KSGELDREIA PR
|
|---|
| |