| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2693 |
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| Symbol | |
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| ID | 3672422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2773375 |
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| End bp | 2775087 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637711399 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_316451 |
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| Protein GI | 74318711 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGAACC TGGTGCTTCG CGTCCTCGGT GCGCTGGCCT GCGTGTGGGC CGCGCACGCG
GCGGGCGCGC CGCTGTCGAC CGCGGTCGAA CATCCCGCCG CGGTCGGCCG CGCCACCACG
TTTCTGCAGG AGCAGCAGGG GCGGCTCGAG TGGCGCGCCG CACTGGCGGC GGCGCGCGCC
GGGCGCTTCG CGCCGGGCAG CAGCCCGGTG CTGAATTTCG GTATCGGCGC GGCGCCGGCA
TGGATCCATT TCACGGTCGA TAATCCTTCC AAGGCCGTCG CCCAGCGCCG GCTCTCGATC
GAGACCGCCT GGCTCGATCG TATCGAGGTC TTCGTCGTGC AGCAGGGCCG GCTCGTCGCG
CACCGCCTCG CCGGCGACCG TCTGCCTTAC GCCGCGCGTG AAGTCGTCGG CCGCTACTTC
GTGTTCGATA CGGTCTTCGC ACCCGGCGCG AGCGACGTGC TGATCCGCAT CGAGACACCG
GACCCGATGG TGATTCCGCT GTATCTGCAA AGCAGCGAAG CCGCCGCGGC GCGGCAGACG
CGGCAGGAAC TCAGCTACGG TGCGGTATAC GGCTTCCTGT TCGCGCTGCT GGTCTACAAC
GCCATCCTCT ACGCCAGCCT GGGTGGCGCC CGCTACATTT CGTACGCGTT CTACCTGGCG
ATGTTCATGC TGATGAATAT CGCCTATACC GGCCACGGCT ACGCCTGGCT CTGGCCCGAG
TCGACCGTCT GGCAGCAGTG GTCCAACCCG GTGCTGATGT ATCTCTACGG CGCCGCCGGT
CTGCTGTTCG CCGTTCGCTT TCTGGATCTC GGCGTGTTCT TTCCGCGGGT TCGCCGCGCC
GTGTTCGTGT ACAGCGCCGC TTTCGGCACG GCGCTCGTCG CGGCGGTCGC GGCGGGCCGC
CAGGTCGCCG CGCTGTGGGT GTCGTTCAGC TTCGTCTTCC TGTTCACCGG CCTCATGCTC
GCGCTTGGCT TGATTGCCGT GCGCGCCGGG CAAAAACCCG CGCGTTATTT CCTGATCGCC
GCGCTCGCGG CGATGGTAGG TGCGGCACTG ACCACGCTGT CGACCTGGGG CTTCGTCCCG
CACAACGCGT GGACCTTCCG CGCCGTGGAG GTCGGCATGC TGTTCGATGC CACGCTGCTG
GCCCTTGCGC TCGCCTACCA GTTCCGTGTC GGGCAGGAGC AGCAGCTGCG TGCCGAACAG
CTCGCGCAGC TCGATCCGCT GACGGGGCTT AACAACCGTC GTGCCTTCTA CGGCATGACC
GCGGCGGCGT GGAGCAATGC GCTGCGCCAC GCGCATGCCA CCTCCGTCCT CTTGCTCGAC
ATCGATCACT TCAAGCAGAT CAACGACCGC TACGGTCACG CTGAGGGCGA CGCGGTGCTG
AAGACGGTCG CCGGCGCGTT GAAACAGTCC GTCCGCCAGG GCGACGTGCT CGCGCGCTGG
GGCGGCGAGG AGTTCATCGT GTTCTTGCCC GAAACGGGCC TGCGCGACGC GGCCCTGCTG
GCGGAACGGC TGCGCGTGTC GATCGCCGCG CTGAGCGTGA CGGGCCGTGT CGGCACGATG
GCCGTCACCG CGAGCATCGG CGTGGCCGAG CGCGCGGACC ATGCGACGCT CGATTCGCTG
ATCGCGGCCG CGGACGCGTG CCTGTTCGCT TCCAAGCAGC AGGGGCGCAA CCGGGTTACG
AGCGGCGGCC AGACACGCGT CGCCGCGGCG TGA
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| Protein sequence | MLNLVLRVLG ALACVWAAHA AGAPLSTAVE HPAAVGRATT FLQEQQGRLE WRAALAAARA
GRFAPGSSPV LNFGIGAAPA WIHFTVDNPS KAVAQRRLSI ETAWLDRIEV FVVQQGRLVA
HRLAGDRLPY AAREVVGRYF VFDTVFAPGA SDVLIRIETP DPMVIPLYLQ SSEAAAARQT
RQELSYGAVY GFLFALLVYN AILYASLGGA RYISYAFYLA MFMLMNIAYT GHGYAWLWPE
STVWQQWSNP VLMYLYGAAG LLFAVRFLDL GVFFPRVRRA VFVYSAAFGT ALVAAVAAGR
QVAALWVSFS FVFLFTGLML ALGLIAVRAG QKPARYFLIA ALAAMVGAAL TTLSTWGFVP
HNAWTFRAVE VGMLFDATLL ALALAYQFRV GQEQQLRAEQ LAQLDPLTGL NNRRAFYGMT
AAAWSNALRH AHATSVLLLD IDHFKQINDR YGHAEGDAVL KTVAGALKQS VRQGDVLARW
GGEEFIVFLP ETGLRDAALL AERLRVSIAA LSVTGRVGTM AVTASIGVAE RADHATLDSL
IAAADACLFA SKQQGRNRVT SGGQTRVAAA
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