Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2647 |
Symbol | |
ID | 3672376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2720432 |
End bp | 2720749 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637711353 |
Product | carboxysome protein B |
Protein accession | YP_316405 |
Protein GI | 74318665 |
COG category | [C] Energy production and conversion [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4576] Carbon dioxide concentrating mechanism/carboxysome shell protein |
TIGRFAM ID | [TIGR02704] carboxysome peptide B |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATCA TGCGCGTGAT GTCGGATCTG GTCTGCACCC GGCGCATCCC CGGCCTGTAC AGCGCGTCGC TGCGCGTACT GGCCGACCAG AAAGGCGTGC TCGCCGTGGC TGTCGACCCG GTCGGCGTGC CGGAAGGCAA ATGGGTATTC ACCGCCGGCG GCTCGGCCGC TCGCTACGGC GCCGGCGATT ACAGGATTCT TACCGATTTG ACGATCCTCG GGATCATCGA TCAGTGGGAT GTGGTGGATG GGCACCACGA GGCAACGAAG GCAGTTTCAT TAACGTGTAA AGGAGAAACA TCATGGCAAA CGCAATGA
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Protein sequence | MEIMRVMSDL VCTRRIPGLY SASLRVLADQ KGVLAVAVDP VGVPEGKWVF TAGGSAARYG AGDYRILTDL TILGIIDQWD VVDGHHEATK AVSLTCKGET SWQTQ
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