Gene Tbd_2647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2647 
Symbol 
ID3672376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2720432 
End bp2720749 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content60% 
IMG OID637711353 
Productcarboxysome protein B 
Protein accessionYP_316405 
Protein GI74318665 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4576] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID[TIGR02704] carboxysome peptide B 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA TGCGCGTGAT GTCGGATCTG GTCTGCACCC GGCGCATCCC CGGCCTGTAC 
AGCGCGTCGC TGCGCGTACT GGCCGACCAG AAAGGCGTGC TCGCCGTGGC TGTCGACCCG
GTCGGCGTGC CGGAAGGCAA ATGGGTATTC ACCGCCGGCG GCTCGGCCGC TCGCTACGGC
GCCGGCGATT ACAGGATTCT TACCGATTTG ACGATCCTCG GGATCATCGA TCAGTGGGAT
GTGGTGGATG GGCACCACGA GGCAACGAAG GCAGTTTCAT TAACGTGTAA AGGAGAAACA
TCATGGCAAA CGCAATGA
 
Protein sequence
MEIMRVMSDL VCTRRIPGLY SASLRVLADQ KGVLAVAVDP VGVPEGKWVF TAGGSAARYG 
AGDYRILTDL TILGIIDQWD VVDGHHEATK AVSLTCKGET SWQTQ