| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2629 |
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| Symbol | |
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| ID | 3672358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2702008 |
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| End bp | 2703009 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637711335 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_316387 |
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| Protein GI | 74318647 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.751964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGACT TCGTCGCGCG ATATTTCCTT TTTCTCGCCG AGGCCGCGAC GCTCGTGCTC
GCGGTGACCG GCGCGATCGC CGCGCTGATC GCAGTAGCGC GGCGCAGAAG CGAAGACTGC
GGCCGCCTCC GCGTCAGCGA CGTCGGACGC CGGTTCGCGG CGGCCGGCGA CGAAATCCGC
AGCGCACGAC TCGACAAGCG CACCTACCGG CGCCCGCGCC GGACAGGCCG GCACCGCAGG
ACGCGGCCGG AAACGACGAA GGCGACGCCG TGCAGCTACC TCCTCGACTT CAAGGGCGAC
ATCCGTGCGA GCGCGGTTGC CGCACTGCGC GAGGAGGTCA GCGCCGTTCT TGAAGTCGCC
CAGCCCGGCG ACGCGGTACT CGTCCGGCTC GAAAGCGGCG GCGGCCTCGT CAACCGTTAC
GGTCTCGGCG CCGCCCAGTT GCTGAGGATC CGCGACGCAC AGCTGCCGCT TACCGTAATG
GTCGACAGCG TCGCCGCAAG CGGCGGTTAT CTGATGGCCG CCGTCGCCGA CACGATCGTC
GCCTCGCCTT TTGCGCTCGT CGGCTCGATT GGCGTCGTCG CGCAGACGCC CAATTTCCAT
CGCTGGCTGC GGGCGCGCGA CATCGACTGG GAGCAGTTCA CCGCGGGGCA ATACAAACGG
ACCGTGACGC TGTTCGGCGA GAACACCGAA ACGGGCCGCG CCAAGCTGCG CGAGGAACTC
GACGACATCC ACGCGCTGTT CCGTGCGTTC GTGCAAGCGC GCCGCCCGCA GCTCGACGTC
GACAAGGTCG CCACCGGCGA GACCTGGCTC GGCAGCCGGG CGCTCGAACT CGGGCTCGTC
GACGAAATCG CGACCAGCGA CGAGCTCATT CGCGCGGCCT GCCGCCGCGG CAAGGTGCTG
CACCTGAGCT TCCAGCGCAA AGCGCGGCTG ACCGAGCGCG TCGGGCGCGC GGCCCAGACC
ATGTGGGACG GAATCTGGCA GCCACCCCAG CCGCTACGCT GA
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| Protein sequence | MNDFVARYFL FLAEAATLVL AVTGAIAALI AVARRRSEDC GRLRVSDVGR RFAAAGDEIR
SARLDKRTYR RPRRTGRHRR TRPETTKATP CSYLLDFKGD IRASAVAALR EEVSAVLEVA
QPGDAVLVRL ESGGGLVNRY GLGAAQLLRI RDAQLPLTVM VDSVAASGGY LMAAVADTIV
ASPFALVGSI GVVAQTPNFH RWLRARDIDW EQFTAGQYKR TVTLFGENTE TGRAKLREEL
DDIHALFRAF VQARRPQLDV DKVATGETWL GSRALELGLV DEIATSDELI RAACRRGKVL
HLSFQRKARL TERVGRAAQT MWDGIWQPPQ PLR
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