Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2621 |
Symbol | cbbO1 |
ID | 3672350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2692428 |
End bp | 2694785 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637711327 |
Product | rubisco activation protein CbbO |
Protein accession | YP_316379 |
Protein GI | 74318639 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4548] Nitric oxide reductase activation protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.808278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCA AACTCGAAGA CTACGCCGAC CTGCTGGAAG ACCTGTCCGA GCACAGCCGG GCTGCGCTCG ACGCCAATTG GCACGAAGCG ACCAAGGTGT TCTCGCCGCG CGGCCTCGAC AACTACCTGA AAGGGATCTC AGCGATCCGC GGTCTCGGTC GCGGCGACTC GCTCGTGGAA ACCTGGATCG AGGAGACGCC GCGCGTGGCC AAGGAGGTCG GCGAGGACGT CGTCAGCGAA CTCGCGACCG CGTCGCTGAT GCTCGCGTCG AAGACCTCGG GTACGGTGAT CGAGCTTTTG CTCGGCACGG CGGCGACCGC GGCGAACCGC CTCGGCGACG GCCAGCTCTT CCTCAACTAC CTGCAGTTCA TCAATACCCT GATCGCGCAG GCGCCGCGTG GCGTGCGCCC CATGCTCGAC AAGCTCGAGG TGCTGTTCCA GCACCTGACA CTCGGCGGCC TCCGGCGCTG GGCGCTGTGG GGCGCGCATG CGCACCGCAC GAATTACGAA GAGCAGATCA AGTATTTCAG CCTCGAGACC AAGGAATCGA TGGCGATGCT GCAGAAGGAG CGCAAAGGCA CCCTGCTCGT CGACGTGCAG CGCCGCATCA ACATGTATCT CCGGGCGTTG TGGGCGCGCG ACTTCTTCAT GCGTCCGACC TCGGGCGACT TCGAGTCGCG CGAGGGCTAC AAGCCCTACA TCGAGGATTA CCTGCTGCAC CTGCCCGACG CCTACGACGA CTTCGCGCCC GAAGGCATGG AGCCCGTGCC CGGCCTCGAA CTCTACCGCG CGACCGCGGC GCATTGCGCC GCCCACGTCG TCGAGACCCG CGTGCCGATT TCGGCCGAAG CGCTCAATCC CCTGCAGATG GCCGTGATCT CGGTGATCGA GGACGCGCGG GTCGAGACCC TGTCGATCCG CCGCTTCCCC GGCCTCAAGC AGCTGTGGGC GAAGCTCCAC GTCGCGACGC CGGAGATGAA CGCGACCGTC GGCGACTATC TCGACCGCCT GGCGCGCGCG CTGCTCGACG AAACCTACGT CGATGACGAT CCCTGGATCG CCGAAGGCCG CACGCTGTTC GCCGCGGCTA CAGACCGGCT CGGCAACAAC CAGACCTCGT GGGAGATCGG CGTGCAACTC GCGCACAGCA TCGCCGACAA AAAGATCCCG TTCAATCCGC GCACGGACGT GCTCTCCGCA CCGTATCGCG ACGACAACCG CTATTTCTGG GAATTCGAGG AATTCGATTT CGCCAAGGCC GCGACCGCCG GTTACGAGTC GGTCAAGCAG GTTCGCAAGA ACGTCAGCGT GATGGAGATG ATCAACGAGA TCGACGTCGA AACCGCCGGC GACGACGCCG AGGAAATCTG GGTCCTGTCG ACCGAGCTCT TCCCCTACGA AAACATCGGC GACGAGAGCA ACGGCAAGTC GTACAACGAA ATGGAAGGCA AGGCGCCGGT GTCCGAACCC TTCCATTATT CGGAGTGGGA TTATCAGATC CAGCTCGAAC GGCCTGCCTG GGCGACCGTG CTCGAAAAAC GCGCGAAGCT CGGCGAGCTC GAGGTCATCG ACGCGATCAC CGCGCAGTAC AAGCGCGAAA TCCATCGCAT GAAGTTCCTG CTCGATGCGA TGCAGCCGCA GGGCGTGCAG CGCATCCGCA AGCTCGAGGA CGGCGACGAG ATCGACATCA ACGCCGCGAT CCAGAGCTTC ACCGACATCC GGCTCGGCAA CCAACCCGAC CCGCGCATCA TGATGCGTTC GGTCAGGAAG ACGCGCGACT TCTCGATCCT GGTGCTGCTC GATCTTTCCG AATCGACCAA CGAGACCGTG CAGGACCAGG AATACTCGGT CCTCGATCTG ACGCGCCAGG CCTGCGTGCT GTTGGCGGAC GCAATCAACA AGGTCGGCGA CCCGTTCGCG ATCCACGGCT TCTGTTCGGA CGGCCGCCAC GACGTCGAGT ACTACCGCTT CAAGGACTTC GACCAGCACT GGAACGAGGT GCCGAAGGCG AAGCTCGCCG GCATGACTGG CCAGCTCTCG ACCCGCATGG GGGCGGCGAT TCGCCACGCC GGCCACCATT TGAAATTGCA GCGCTCGGCG AAGAAGCTGC TGATCGTCAT CACCGACGGC GAGCCCGCCG ACATCGACGT GCGCGACCCG CAATACCTGC GCTACGACAC GAAGAAGGCC GTCGAGGAGG TCGCACGCAA CGGCGTGACG ACCTATTGCA TGAGCCTCGA CCCGCGCGCC GACAACTACG TGAGCCGCAT CTTCGGGCAG AAGAACTACA TGGTCGTCGA CCACGTGCAA CGCCTGCCGG AGAAGCTGCC GATGCTGTAC GCCGGGCTCA CGCGCTGA
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Protein sequence | MSIKLEDYAD LLEDLSEHSR AALDANWHEA TKVFSPRGLD NYLKGISAIR GLGRGDSLVE TWIEETPRVA KEVGEDVVSE LATASLMLAS KTSGTVIELL LGTAATAANR LGDGQLFLNY LQFINTLIAQ APRGVRPMLD KLEVLFQHLT LGGLRRWALW GAHAHRTNYE EQIKYFSLET KESMAMLQKE RKGTLLVDVQ RRINMYLRAL WARDFFMRPT SGDFESREGY KPYIEDYLLH LPDAYDDFAP EGMEPVPGLE LYRATAAHCA AHVVETRVPI SAEALNPLQM AVISVIEDAR VETLSIRRFP GLKQLWAKLH VATPEMNATV GDYLDRLARA LLDETYVDDD PWIAEGRTLF AAATDRLGNN QTSWEIGVQL AHSIADKKIP FNPRTDVLSA PYRDDNRYFW EFEEFDFAKA ATAGYESVKQ VRKNVSVMEM INEIDVETAG DDAEEIWVLS TELFPYENIG DESNGKSYNE MEGKAPVSEP FHYSEWDYQI QLERPAWATV LEKRAKLGEL EVIDAITAQY KREIHRMKFL LDAMQPQGVQ RIRKLEDGDE IDINAAIQSF TDIRLGNQPD PRIMMRSVRK TRDFSILVLL DLSESTNETV QDQEYSVLDL TRQACVLLAD AINKVGDPFA IHGFCSDGRH DVEYYRFKDF DQHWNEVPKA KLAGMTGQLS TRMGAAIRHA GHHLKLQRSA KKLLIVITDG EPADIDVRDP QYLRYDTKKA VEEVARNGVT TYCMSLDPRA DNYVSRIFGQ KNYMVVDHVQ RLPEKLPMLY AGLTR
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