| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2598 |
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| Symbol | |
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| ID | 3672574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2674721 |
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| End bp | 2675968 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637711304 |
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| Product | putative tRNA and rRNA cytosine-C5-methylase |
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| Protein accession | YP_316356 |
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| Protein GI | 74318616 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.55407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.490285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTGA CCCCGCCGCT CCTGCAACTC GCCACCCAGG CACTCGACCT GGTGTTGGAC
TTCAAACGCC CCGCCGATGC CGTGCTGTCG GCCTTCTTCC GCGAGAACAG GAAGCTCGGC
GCGCGTGACC GCGGGTTCGT CGCCGAAGCC GTGTTCGGCG TGCTGCGGCG CTACCGCTAC
CTGTCCCACG TCGTGCCCGC GGCGAATCCG CGCACGCTGA TCATCGCCTG GCTGATCAAG
ATCCAGGGAA TGAGCGGGGC GGCGCTGGAG AAGTTCGCCA AACCCGAGCT GGTCGACCAC
ATCCGCAGTG CGCGCCCCGA GGGCTTGCCG CTTGCCGTCA CCGCGGAGCT GCCCGACTGG
GTGGTCGACA AGCTGCGGCC GTCGATGAGC GACGCCGACA TCCTCGCACT CGGCCGGGCG
CTGCAGCAGC CCGCGCCGCT CGACGTGCGC GTGAATACCC AGAAGACTGA CCGCGACGTC
GTGCTCGCGC GGCTGCAGGC CGAGGGCATG GCGGTCGAGA TCACGCCCTT TTCGCCGTGG
GGCCTGCGCT TCAAGGACCA CCCGGCGATC AATCGTCATC CCTTGTTTCT CGACGGCAGC
CTCGAGGTGC AGGACGAGGG CAGCCAGTTG CTGGCGCTGC TGCTCGAGGC GCGGCGCGGC
GAGATGGTGT GCGATTTCTG CGCAGGCGCC GGCGGCAAGA CGCTCGCGGT CGGCGCGACC
ATGGCCTCGA CCGGGCGGCT TTATGCCTTC GACGTCGCGG AAAAGCGGCT CGCCAAGCTG
AAGCCGCGGC TCGCGCGTTC GGGGCTGTCG AACGTCATGC CGGAGCTTAT CGCTTCGGAG
AACGACGTGC GGGTCAAGCG TCTCGCCGGC AAGCTCGACC GCGTGCTCGT CGATGCGCCG
TGTTCGGGGC TCGGCACGCT GCGCCGCAAC CCCGACCTCA AATTCCGCCA GTCGGCCGAG
AGCGTGGCCG AACTCGCGGC GAAGCAGGCG TCGATCGTGC GCGCCGCGGC GAGACTGCTC
AAAGTCGGCG GACGTCTGGT CTATGCGACG TGCAGCATCC TGCCCGAGGA GAACGAGGCG
ATCGTCGAAG GTCTCGTCGC CGAAGGCGGG TTCGCGCTGC AGCCGGTCAA TGAAATCCTC
GCCCAGCACA AGATTCCGCT CGACACGGGC CCGATGCTCA AACTCTCCCC GGCGATTCAC
CGGACCGACG GGTTCTTCGC GGCCGTTCTC ACCAAGACCG GCGCTTGA
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| Protein sequence | MELTPPLLQL ATQALDLVLD FKRPADAVLS AFFRENRKLG ARDRGFVAEA VFGVLRRYRY
LSHVVPAANP RTLIIAWLIK IQGMSGAALE KFAKPELVDH IRSARPEGLP LAVTAELPDW
VVDKLRPSMS DADILALGRA LQQPAPLDVR VNTQKTDRDV VLARLQAEGM AVEITPFSPW
GLRFKDHPAI NRHPLFLDGS LEVQDEGSQL LALLLEARRG EMVCDFCAGA GGKTLAVGAT
MASTGRLYAF DVAEKRLAKL KPRLARSGLS NVMPELIASE NDVRVKRLAG KLDRVLVDAP
CSGLGTLRRN PDLKFRQSAE SVAELAAKQA SIVRAAARLL KVGGRLVYAT CSILPEENEA
IVEGLVAEGG FALQPVNEIL AQHKIPLDTG PMLKLSPAIH RTDGFFAAVL TKTGA
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