Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2597 |
Symbol | |
ID | 3672573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2672853 |
End bp | 2674661 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637711303 |
Product | long-chain fatty-acid-CoA ligase |
Protein accession | YP_316355 |
Protein GI | 74318615 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.366446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCT TTCATCCCGA CCAGCTCGGC ACGCTGTGCG GCCTGTTCCG CGCCCGGGTC GCGGCGACGC CGGCCCGGGT CGCCTACCGC CAGTTCGACG AGGCGCGCGA CAGCTGGGTG AGCTTCACCT GGAGCGAGGT CGCGGCAGAG GCCGCGCGCT GGCAGGCGGC GCTCGCACGC GAGGGTCTCG CGCCAGGCGA CCGCGTCGCC GTGATGCTGA AGAACTGCGT CGAATGGGTG ATCTTCGACC AGGCCGCGCT CGCGCTCGGT CTCGTCACGG TCCCGCTCTA TCTCGACGAC CGCGCCGAGA GCGCGGCCTA CATCCTCGAT AACGCCGACG CCAAGCTGCT GCTCGTCGAG GGCCGCTTCC AGCTCAAGAA GCTCGCCGAG ATCGCGGCCT CGTCGCCGGG CCTGCAACGC ATCGTCTGCC TGGTCGCCCC GGAGAGCCGG CTTGCCGACT GGAGTCCGCG CTTCGTCGTG GCGGCCGAGT GGCTGGAAAA CGCCGTCGCC ACCGCGGTCC CCGAGCGCAG CCTCGCGCCC GACCTCCTCG CGAGCATCGT CTACACCTCG GGCACCACGG GGCGGCCGAA GGGGGTCATG CTGACGCACG ACAACCTGCT GTGGAATGCC TACTACGCTT CGCACTGCGC CGACTTCGGG CCGCACGAGG TGTTTCTCTC CTTCCTTCCG CTGTCGCACA CGCTCGAGCG CACGGGCGGC TATTACCTGG CCATGCTGCT CGGCGCCGAA GTCGCCTACG CGCGCTCGAT CGCCCAGCTT GCGCAGGATC TGCAGGCCAT CCGGCCGACC GTGCTGATCT CGGTGCCGCG CATCTACGAG CGGGTCTACG GCCGCATCCA GGATGGGCTA GAGAAAAAGG GCGCGCCCGC CCGAGCGCTG TTCAGGCTGG CGGTCCATGT CGGCTGGCGG CGCTTCGAGC GCAGCCAGGG GCGTGCGTAC TGGCATCCCG AACTGCTGCT CTGGCCGCTG CTCGAGCGGC TCGTCGCGCG CAACGTCACG CAAAAGCTCG GCGGACGCCT GCGGCTGGCG ATTTCCGGCG GCGCCGCGCT CTCGCCCGAG GTCGCGCGCG TGTTCATCGG TCTCGGCGTG CCGGTCTACC AGGGCTACGG CCTCACCGAA ACGAGCCCGG TCGTGTGCGT GAACCGTCCC GACTCGAATT CGCCCGCGAC GATCGGACAG CCACTACCCG GGGTCGAGGT GCGCATCGGC GACAACGACG AACTGCTCAC GCGCAGCCGC TGCGTCATGC GCGGCTACTG GAAGGACGAA GCCGCGACAC GCGCGATGAT CGATGCGGAC GGCTGGCTGC ACAGCGGCGA CCAGGCCCGT GTCGACGCCG ACGGTCACTA CACGATCATC GGCCGGATCA AGGACATCAT CGTGCTGAAC AACGGCGAGA AGGTCCCGCC GACCGATATG GAATCGGCGA TCCTCCTCGA TCCGCTTTTC GAACAGGTGA TGGTCGTGGG CGAGGGGCGC CCCTACCTCG CGGCGCTCAC CGTGCTGAAC GAGGCGCACT GGGAGGCCTT CGCGGCGAGC CTGCATCTCG ATCCGGCCCA GCCCGCGACC CTGCGCGACC CCAAGGTCAC GCGCGCCCTG ACGCACCGCG TCGCGCACCA CCTGCGGCAT TTCCCCGGCT ACGCGCAGAT CCGTCGGCTG CACCCGGACC TGCGACCGTG GACCGTCGAA GACGGCCTGC TGACGCCGAC CCTCAAGGTC CGGCGTGCGC AGGTGCTCGA CCGCTATCGA GCAGCCGTCG AGGCCATGTA CGCGAATTTC GCACGTTGA
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Protein sequence | MTAFHPDQLG TLCGLFRARV AATPARVAYR QFDEARDSWV SFTWSEVAAE AARWQAALAR EGLAPGDRVA VMLKNCVEWV IFDQAALALG LVTVPLYLDD RAESAAYILD NADAKLLLVE GRFQLKKLAE IAASSPGLQR IVCLVAPESR LADWSPRFVV AAEWLENAVA TAVPERSLAP DLLASIVYTS GTTGRPKGVM LTHDNLLWNA YYASHCADFG PHEVFLSFLP LSHTLERTGG YYLAMLLGAE VAYARSIAQL AQDLQAIRPT VLISVPRIYE RVYGRIQDGL EKKGAPARAL FRLAVHVGWR RFERSQGRAY WHPELLLWPL LERLVARNVT QKLGGRLRLA ISGGAALSPE VARVFIGLGV PVYQGYGLTE TSPVVCVNRP DSNSPATIGQ PLPGVEVRIG DNDELLTRSR CVMRGYWKDE AATRAMIDAD GWLHSGDQAR VDADGHYTII GRIKDIIVLN NGEKVPPTDM ESAILLDPLF EQVMVVGEGR PYLAALTVLN EAHWEAFAAS LHLDPAQPAT LRDPKVTRAL THRVAHHLRH FPGYAQIRRL HPDLRPWTVE DGLLTPTLKV RRAQVLDRYR AAVEAMYANF AR
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