Gene Tbd_2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2454 
Symbol 
ID3671773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2525239 
End bp2526447 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content71% 
IMG OID637711160 
Productouter membrane protein 
Protein accessionYP_316212 
Protein GI74318472 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAG CACAGGGGGC CTGCCTGCTT GCCGGCCTCG CGCTGCTGGG CGGCGGCCAG 
GCGGCCGACA TGCCGGCGCA GGAAGTCGGT ATTTTGTTGG GTGCGGGCTG GGCGGACGAT
AGTCTCGTCG GCAGCGAGGA CGACGCGGCG AACCCGCTGT TCGGCCTGCG CTACAGCCAG
CAGCTCGATC GCGATTTCCG GCTGTTCGGC GATTTCGTCT ACGGTGCCTA CGACAGCGAC
CGACCGGGGG TCGGCGACGC GAAACTCGCC ACGCTGCGTG GCGGCGTCGA GTGGGCGTTC
TCCCGCCAAC GGCAATACGA CTGGTTCCTC GCCGGCGGTC TCGGCCTGAT CCGCGCCGAG
ACCGACGGCG ACGTCGACTT CACGCGCCCC GCGGCGTCGT TCGGCGTCGG CCAGAACTGG
GCGTTCGGTT CGAACGACGC GCTGCGCTGG GAGCTGCGTG CCGACCGTTC CTTCGGCAAC
GATGCGCTGC CGGGTGCGGG GTTGACCCAG GTTCAGGTCC TCGTCGGCTA TGCCTGGGGC
CTCGGCGAGC CGTCCGACGC CGATGGTGAC GGCGTGATCG ACCGCGTCGA ACAATGCCCC
GGCACGCCCA AGGGTGCCGC GGTCGATGCG CTGGGCTGTC CGCTCGATTC CGATGCCGAC
GGGGTGTTCG ACGGCCTTGA CCGCTGTCCG TCGACCCCGC CCGGCGCCAC CGTCGACGCG
GCCGGCTGTC CCTCCGACCG CGACGGTGAC GGCGTTCCCG ACGCGCGCGA CAAATGCCCG
GCCGAAGCCG GGCGCGGCAG CGCCGACGGC TGCCCGCCGC GGGCGGCGCG TGAAGCCGAA
CCCGAGCCCG AGCCGCCAAG GCCGTCCATG CCACGGCGGA TGACGCTCGA CGGCGTGAGC
TTTGAGCCCG GCAGCGTGCG TCTGACGCCC GACTCGATCA CGATCCTCGA CAATGCCGCG
GCCTCGCTGA ACGCATGGGG TGAAGTCAGG GTCGAGGTCG CCGGTCACAC CGACTCGACC
CACTCGGCCG CCTTCAACCT CGAGCTCTCG CAGCGCCGGG CCGAGGCCGT GCGGGCCTAT
CTCGTGAAAA AAGGCGTTCG CGCCGAACGG CTGACCGCCC GCGGCTACGG CGAGTCGCAG
CCGGTTGCGG ACAACCGCAC CGCGGCCGGC CGCGCGCAGA ACCGCCGCGT GGAACTCGTG
CCGCAGTAG
 
Protein sequence
MKRAQGACLL AGLALLGGGQ AADMPAQEVG ILLGAGWADD SLVGSEDDAA NPLFGLRYSQ 
QLDRDFRLFG DFVYGAYDSD RPGVGDAKLA TLRGGVEWAF SRQRQYDWFL AGGLGLIRAE
TDGDVDFTRP AASFGVGQNW AFGSNDALRW ELRADRSFGN DALPGAGLTQ VQVLVGYAWG
LGEPSDADGD GVIDRVEQCP GTPKGAAVDA LGCPLDSDAD GVFDGLDRCP STPPGATVDA
AGCPSDRDGD GVPDARDKCP AEAGRGSADG CPPRAAREAE PEPEPPRPSM PRRMTLDGVS
FEPGSVRLTP DSITILDNAA ASLNAWGEVR VEVAGHTDST HSAAFNLELS QRRAEAVRAY
LVKKGVRAER LTARGYGESQ PVADNRTAAG RAQNRRVELV PQ