| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2320 |
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| Symbol | |
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| ID | 3673448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2394864 |
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| End bp | 2396009 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637711025 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_316078 |
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| Protein GI | 74318338 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC GCATTCTTGT GTCGATCGTC GTGCTGGCGC TGCTCGCTGC GGTCGTTTAT
CGCGTCCAGC AGCAAGGCGC GGGCGAGCGC CGCGGCAGCG GCGACCGCGC GCTCGCCGTG
CGCGCGGTCC CGGTCGAAGA GCGCGATTTC CCGCGTGTCC TCGATCTTCC CGGCACGCTC
GAAGCCGCGC AACAGGTCGC GATCGTCGCT CAGGTCGGCG GCACCGTGCT GCGGCAACAC
GTCGAGGAGG GCGACGCGGT CGCCGCGGGC AAGATCCTCT TTACGCTCGA CGCACGCCCG
GCGCGCGCGC GCATCGCGCA GAGCCAGGCC ACCCTCGCCG GTGCGCTCGC CGAGGCCGAG
GAGGCCGAAC GCCAGCTCCG TCGCCTCGAC CCGCTGATGG CCTCCGGCTA CATCAGCCGC
CAGGAATACG AGACCGCACG CGTCGCGCTC GAGGCGGCAC GGGCGCGCGC GGGCGCGGCC
CGCGGCGAGC TCGAGGCCGC CCGGCTCGAC GTCGCATACG CCGCGATACG CGCACCGATC
GCCGGCCGCG TCGGACGGAT ATCCGTGCGG CCGGGCAGCC TCGTGCAGGC GGGCGGCGAA
CCGTTGACGA CGCTAATCGC GCCCGGGACG CTCGACGTGC GGGCGAGCGT CGCCCAGCAG
GACTGGCCCG AACTCGCGGC CGCCCGGGAG CAGGGGCGCG TCACCGCCGA AGTCTTCCTC
GACACCCATC CGGGCGCGCG CGCCCGTGGC GAGCTCGTCT TCGTCGACAC GCAGATCGAC
GCGCCGACCG GCGCCGTGCC GATCAAGGTC AGGCTCGCCG ACCCGCCGCT CGGCCTGCTG
TCGGGCCAGA GCGTGCGCGT GCGCCTGCTT CTCGGCAGCG ATCCCGGTGC CCGGGTCGTT
CCCGAGGCCG CGCTGCAGCA CGGGCAGGCG GGCAGCTACG TCTACGTCGT GCGCGGGGGC
AAGGCCGTCG TCCAGCCGGT GACCTCGGTG CGCAGCCTCG ACGGCGAACA CATGGTCGAG
GGCGAGCTGC GTGCCGGCGA ATCCGTGCTC ACCGAAATCC CCCAGCGGCT CAAGGCCGGC
GACGCGGTCA GGCTCGAGCC CGCGGCGGGC GCCGGTGCCC GGACCGGAAC GGCGCGTCCG
CGGTGA
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| Protein sequence | MKLRILVSIV VLALLAAVVY RVQQQGAGER RGSGDRALAV RAVPVEERDF PRVLDLPGTL
EAAQQVAIVA QVGGTVLRQH VEEGDAVAAG KILFTLDARP ARARIAQSQA TLAGALAEAE
EAERQLRRLD PLMASGYISR QEYETARVAL EAARARAGAA RGELEAARLD VAYAAIRAPI
AGRVGRISVR PGSLVQAGGE PLTTLIAPGT LDVRASVAQQ DWPELAAARE QGRVTAEVFL
DTHPGARARG ELVFVDTQID APTGAVPIKV RLADPPLGLL SGQSVRVRLL LGSDPGARVV
PEAALQHGQA GSYVYVVRGG KAVVQPVTSV RSLDGEHMVE GELRAGESVL TEIPQRLKAG
DAVRLEPAAG AGARTGTARP R
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