| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2212 |
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| Symbol | |
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| ID | 3671603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2290719 |
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| End bp | 2292224 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637710917 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_315970 |
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| Protein GI | 74318230 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00757237 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTGCTC ATGCGCCCGC CCGAGCCGCG ACCGCCTCCT TGCGGCGCCA TTTCGTATGG
CTGCTGCTTG GGGTCGTGCT GATGCTGGTT GGGGGGGTGG GCCTGAGCCT GTGGTTCAGC
CTGAAGGCCG AACGCCAGAA CCGGGATGGG TTGCTGCGAT TACACGCCGA AAGCGCGCGG
GATGGCGTGA AGCGGCGTCT TGACCACTAT CGCAGCCTGG TCGACAAGCT GGCGCGCGAT
CCCGAGCTGG AGGACCTGCT GCGCTTCGGT GGCTCGCCCG CCCCGCAGGA CTGGGTCCAG
TCGCGCCAGC CCCTGATCCC GGACTTGCAC GGCTTGACCT TGCTCACGCC CGAGGGTGAG
GTGCTGGGCG ACGGGACGAC CTTGCGGATC GGCCCGGACT GCCGCGCGGA ACTGCGGTCC
CGACAACCGC TTCGCGGCAG GAGACTGCAC CTCCAGCGGG GCGTCGGCGG CCGCGACCAT
CTCGACCTGG TATCCGCCGT GCGCGGGGTC GATAACGAGC TGCTGGGCGG TGTTCTTCTG
AGTATGCGAC TGGATGCCCT GAAGCGGATT CTCGAAGAGG CCGCCCATCC CGGGCAGACC
CTCACTCTGC TCGACGCCGC CGGCAAGACC GTCGTCAGCA ACGGCGAGGT GGCTGACGCC
GCCCACGAGG TCCGACTGGA CGTGGGGGAA GGTGGCTGGA CGCTGGTCGG GCGGATGCCG
GGTCAGACCC TGACGCACAG CGGCAAGGCG CAGCTCATCG CCGGTGGCGC GACCCTGCTG
GCCGTTCTGC TGCTACTGCA GGCGAGCATG CTGCACCTGC GCCGGGCGAT GCTGCGGGAT
ATCGACGCGA CCCGCGACGC CCTGACCGCC TTGGCGCATG GCGAGCCGGT GCAGGCCATC
GTGCCGCACT ACGTCGAATT CGCGCCGACG GCTGGCGAGA TCAACCTGAT CGCCCTGCAG
CTTCAGGCGC AGCGCGAGCA GCTGGAGCAT CTGAGCCTGA CCGATCCGCT GACCGGCTTG
CCCAATCGCC GCGCATTCGA GACGCGGTTC CCGCAGGCGC TGGGATTCGC CGGGCGCGGC
CTTCGCATTG CGCTGGTGCT GCTCGACATC GATTATTTCA AGCGCATCAA TGACAGCTTC
GGCCATGGTG TCGGCGACCA GGTGCTGCTC GCGCTGGCGC AGACGCTCAA GGCCCTGACC
CGCCGTGCCG ATCTGCCGGC GCGGCTGGCA GGCGACGAGT TCGTCATCCT GCTGGCCGAT
CTCGATACGG CCGGCGTGGC CTTGTGGTAC CGGCGCCTGG CCGACCATTT CCGCAGCGAG
CTCGCTGCCT TGGGCCTGGA TATCCAGACC GGCATCAGCG CTGGGCAGAC GTGGCTGCGC
CGGACGTCGC GCGACACTAT GAACGACGCG CTGGGCCGTG CCGACCGGGC CCTGTATCAA
GCCAAGGCCA GCGGGCGCAA TCAGATCGTC ATCGACGCGC CGCTGGACGA AACCGGCGCA
GGGTAG
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| Protein sequence | MPAHAPARAA TASLRRHFVW LLLGVVLMLV GGVGLSLWFS LKAERQNRDG LLRLHAESAR
DGVKRRLDHY RSLVDKLARD PELEDLLRFG GSPAPQDWVQ SRQPLIPDLH GLTLLTPEGE
VLGDGTTLRI GPDCRAELRS RQPLRGRRLH LQRGVGGRDH LDLVSAVRGV DNELLGGVLL
SMRLDALKRI LEEAAHPGQT LTLLDAAGKT VVSNGEVADA AHEVRLDVGE GGWTLVGRMP
GQTLTHSGKA QLIAGGATLL AVLLLLQASM LHLRRAMLRD IDATRDALTA LAHGEPVQAI
VPHYVEFAPT AGEINLIALQ LQAQREQLEH LSLTDPLTGL PNRRAFETRF PQALGFAGRG
LRIALVLLDI DYFKRINDSF GHGVGDQVLL ALAQTLKALT RRADLPARLA GDEFVILLAD
LDTAGVALWY RRLADHFRSE LAALGLDIQT GISAGQTWLR RTSRDTMNDA LGRADRALYQ
AKASGRNQIV IDAPLDETGA G
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