| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2208 |
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| Symbol | |
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| ID | 3671599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2288149 |
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| End bp | 2288559 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637710913 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_315966 |
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| Protein GI | 74318226 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00626384 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCACGCT CGCGCAAACA GGTCGCCCAG ATCAACGTCG TGCCGATGAT CGACGTGATG
TTGGTGCTGC TGGTGATCTT CATGGTCACC GCACCCTTCA TCAACCCGGC CCAGGTCGAA
TTGCCGAGCG TCGGACAGAC CTCGCAGACG CCGTCGCAGC CGCTCGAAAT CATCATCAAG
GAGTCGGGCG AGTACGTCCT GCGCGACCGC GCACAGGGCG GCGCCGAGCG CCAGGTGGGC
GCGGCGGACC TGGCGGATGA GATCGCGGGC CTGCATCGCG CCTCGCCCGA GCAGGCCGTC
GTCATCGCGG CCGACAAGAA CGTCCGCTAC GACGAAGTGA TGAAGACCAT GACGCTTCTT
CAGCGCGAGC AGATCACGCG CATCGGCCTG CTCGCCCGGC CTGCGCCATG A
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| Protein sequence | MARSRKQVAQ INVVPMIDVM LVLLVIFMVT APFINPAQVE LPSVGQTSQT PSQPLEIIIK
ESGEYVLRDR AQGGAERQVG AADLADEIAG LHRASPEQAV VIAADKNVRY DEVMKTMTLL
QREQITRIGL LARPAP
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