| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2205 |
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| Symbol | |
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| ID | 3671596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2285249 |
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| End bp | 2285815 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637710910 |
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| Product | outer membrane protein, porin-associated lipoprotein |
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| Protein accession | YP_315963 |
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| Protein GI | 74318223 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.604308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00226867 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAAGA TTGCTATCCC CGTCCTGCTG GCCCTGGTCC TGTCCGCATG TGGCACCACC
GGCAGCAAGG ACGCGACCGT CGAAGATCGT ACCGGCGGCT CGAGTGTCAC GACGGTCGAC
AAGGTTGGGG CCGGCGCCGA GAGCACCGGC GTTGACGGCG CAGGCGTCGA GGGGAGCGCG
CTGCCGGGCG ATCAGGCCGC GGGCGATCCG CGCAAGGAGC CGGCCAACGC CTTGTCCAAG
CGCAGCGTCT TTTTCGATTT CGACAGCTTT GTCGTCAAGG ATGAATACCG CCCGGTCCTC
GAAGCACACG CCGGTTACCT CGCGTCGAAG CGCGACGCAC GCATCACGCT GCAGGGCAAC
GCCGACGAGC GGGGCAGCCG CGAATACAAC CTCGCCCTGG GACAGAAGCG CGCCGAAGCG
GTGCGCAAGG CGCTGGCCGT GCTCGGCGTG AGCGACGCGC AGATGGAAGC GATCAGCTTC
GGTGAGGAAA AGCCGCGCAA CGAGGCCGAT ACGGAAGAGG CCTACGCCGA AAATCGCCGT
ACCGACATCG TCTATGGCGA CGAATAA
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| Protein sequence | MKKIAIPVLL ALVLSACGTT GSKDATVEDR TGGSSVTTVD KVGAGAESTG VDGAGVEGSA
LPGDQAAGDP RKEPANALSK RSVFFDFDSF VVKDEYRPVL EAHAGYLASK RDARITLQGN
ADERGSREYN LALGQKRAEA VRKALAVLGV SDAQMEAISF GEEKPRNEAD TEEAYAENRR
TDIVYGDE
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