Gene Tbd_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2010 
Symbol 
ID3672181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2099499 
End bp2100167 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content70% 
IMG OID637710712 
Producthypothetical protein 
Protein accessionYP_315768 
Protein GI74318028 
COG category 
COG ID 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.949714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACAC CGAACACCCC CCCTGCGCCG CTGAGCGATG CGGAGGTCGA CGAGCTGGCC 
GACCTCATCG ACCTTCTCGA CGAGCGTACC GACGTGCCGA TCTCGCTCGA AGGCGTGGAC
GGCTTCATCA CGGCGCTCGC CTGCAGCCCG CGCGCGATCC CGGACACCGA ATACCTTCCG
GTGCTGCTCG ACCGCGACGA GGGACTCGCG AGCGTGTACG AGAACGAGGC CGACGAGCGG
CGTTTTCTCG CGCTGTTCGC CCGGCGGCGC GACGAGGTCG CCCGCGCACT TGCCGCGCCG
ATCGAGAACC TTGCCGACCC GCGCGCGCTT TCGCCGCTGG TCATGGACTG GGAAGCGCTG
CTCGCCGACC TCCCCAAGGA CGAGGCTACA CGGCTGCGTG CCGCCGGGGT CCCGCCCTAC
GCCCAGATGT GGGCCGCAGG CTTTCTGCTC GCGGTCGAGC ACTGGGAAGA CGACTGGACG
CTGCCCGGCG GCAGCAAGGA CGAGGCCTTC GTCGACGAGG TGCTCGACCC GTTCTACATC
CTGGCTGCAC CGCTCGAGGA ACTCAGCGCC GAGGAGCGCG ACACGCGCCG CGAGGACCAC
CTCGCGCTCG CCGTCTGGGG CGCCTACGAA TTGCGCGAGT TCTGGCGCGA CCGCGGACAG
GGCGCCTGA
 
Protein sequence
MPTPNTPPAP LSDAEVDELA DLIDLLDERT DVPISLEGVD GFITALACSP RAIPDTEYLP 
VLLDRDEGLA SVYENEADER RFLALFARRR DEVARALAAP IENLADPRAL SPLVMDWEAL
LADLPKDEAT RLRAAGVPPY AQMWAAGFLL AVEHWEDDWT LPGGSKDEAF VDEVLDPFYI
LAAPLEELSA EERDTRREDH LALAVWGAYE LREFWRDRGQ GA