| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1916 |
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| Symbol | truA |
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| ID | 3674026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2011555 |
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| End bp | 2012337 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637710615 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_315674 |
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| Protein GI | 74317934 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.392139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.974239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCGGA TCGCGGTGGG TCTCGAATAT CGTGGCGTCG GTTTCTGCGG CTGGCAGTCG
CAGCCGCAAG CCTGCGGCGT CCAGGACGCC GTGGAAAAAG CCGTGTCGGC GATCGCCGGC
GAGGCGATCA CGGTCACCGC CGCCGGCCGC ACCGACACCG GCGTGCATGC GGCCTTGCAG
ATCGTGCACT TCGACACGAC CTCGGTCCGC CCGCTGACCG CGTGGGTGCG CGGCGTCAAC
AGCCATCTTC CCGCGGGCGT CGCCGTGTTG TGGGCGCGCG AAGTCGATGC GGAATTCCAT
GCACGGTTTG CCGCTTTCGA GCGCGGCTAT CGCTACGTGC TGCTCAACCA TCCGGTGCGC
CCCGGCCTCA ACGCCGGGCT CGTCGGCTGG CATCACCGGC CGCTCGACGT GGCGTGCATG
AATCGGGCGG CGTCGCCGTT GATCGGACGG CACGACTTTT CCGCGTTCCG CGCAGCCGAG
TGCCAGGCCC GCTCGCCGGT CAAGGAGTTG CGCCGCGCGC TGATCGAGCG GCGCGGCGAT
TACCTGCTGT GCGATTTCCG CGCGGACGGT TTTCTGCACC ACATGGTGCG AAACCTCATG
GGCTGTCTGG TCCAGATCGG TGCCGGCGGC CGCCCGCCCG AGTGGCTGCA CGAGGTGCTG
GCCGGGCGCG ACCGCACGCG TGCCGCGCCG ACCTTCGAGG CGGCAGGACT GTACCTCACG
CACATCCGGT ATCCTGCGCG CTTTGCCCTG CCGGAAAGCT CCGAACGATG GCCGTTCGCG
TAA
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| Protein sequence | MMRIAVGLEY RGVGFCGWQS QPQACGVQDA VEKAVSAIAG EAITVTAAGR TDTGVHAALQ
IVHFDTTSVR PLTAWVRGVN SHLPAGVAVL WAREVDAEFH ARFAAFERGY RYVLLNHPVR
PGLNAGLVGW HHRPLDVACM NRAASPLIGR HDFSAFRAAE CQARSPVKEL RRALIERRGD
YLLCDFRADG FLHHMVRNLM GCLVQIGAGG RPPEWLHEVL AGRDRTRAAP TFEAAGLYLT
HIRYPARFAL PESSERWPFA
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