Gene Tbd_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1889 
Symbol 
ID3673999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1988335 
End bp1989186 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content65% 
IMG OID637710588 
Producthypothetical protein 
Protein accessionYP_315647 
Protein GI74317907 
COG category[S] Function unknown 
COG ID[COG4641] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCAC GTCTTGCCAA GCTGGGCGGT CGGGCTGCAC TCGAACGGCA CCTCCTGCGG 
CAACTCGACG CATCGCTGAA AACGGTGAAG CCCGACCTGG TTGTGTTCGT CCAGGCTTAT
TGGGCGCCCG CTGCGCTTTT CGACATGGTC CGGTCCCAGG GAATACCGGC GGCCGGCTGG
GTGGGCGACA AGTTTGGGCC GCAGGCGAAA GAAAGGGCCT CCCGCCTGGA CCGCGTCTAT
TACACCGACA GCGGATTCCT CGTTGAGGCA GAGACTTTCG GTTTCGCGGA CGACGGGGCT
TATCTGCCGC ACGCCGTCAA TACGCGCCGG TTTCTCTCGG GAGACGTGCC TCGTACCGAT
CGAATCGCGT TCGTCGCAGT GCCCACCCCA CACCGCGTCG CACTTCTCCA GCAGCTGGCC
TTCCCGATCG CGGTCTATGG CCGTGGCTGG AACCTCCTCG GGCGCACACC CCATGACGTA
CATAACGGAT GGCTCGCGCG GGGGCAGCTT CCAGGCCTCT ACGGCGAGAG CCTCGCCGTG
CTCAACATCC GCAACGAGCT CAACGTGTTC GAGGGTCTCA ACCAGCGCAG CTTCGAACCG
GCGGCATGCG CCACGGCGGT GATCCACGAC TATGTGGCCG ACCTCGCGCG ATGCTTCGAG
CCGGGGAAAG AGGTGTTGGT GTTCGGCGGG GTGCAGGAAT TACAGGAAAT CTGCGAGCGC
GTGCGCCGCG ATCCCGCCCT CGTCCGCCGC GTCGGTGCGG CCGCGAAAGC ACGCGTTCAA
GCCGAGCATA CTTGCGCCCA CCGCGCGAAG ACCATCTTGC GGGATTTCGG GTTGGAGTGT
CGCAAGCCCT AG
 
Protein sequence
MGARLAKLGG RAALERHLLR QLDASLKTVK PDLVVFVQAY WAPAALFDMV RSQGIPAAGW 
VGDKFGPQAK ERASRLDRVY YTDSGFLVEA ETFGFADDGA YLPHAVNTRR FLSGDVPRTD
RIAFVAVPTP HRVALLQQLA FPIAVYGRGW NLLGRTPHDV HNGWLARGQL PGLYGESLAV
LNIRNELNVF EGLNQRSFEP AACATAVIHD YVADLARCFE PGKEVLVFGG VQELQEICER
VRRDPALVRR VGAAAKARVQ AEHTCAHRAK TILRDFGLEC RKP