| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1866 |
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| Symbol | |
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| ID | 3672900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1961595 |
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| End bp | 1962701 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637710565 |
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| Product | putative D-amino acid oxidase |
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| Protein accession | YP_315624 |
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| Protein GI | 74317884 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGGCC GCACGCTCGT GGTCGGTGCC GGGGTGTCCG GCTTGGCTGT CGCACTGGCC
CTGTTGCAGC GCGGGCACAA GGTGACCCTG CTGGAGCGCG GCACGGCCGG GGCAGAGTCG
TCGTGGGCGG GCGGCGGCAT ACTCTCGCCC CTGCTGCCGT GGGATTATCC CGACCCCGTT
TCCTCCCTCG CCTTGCGTGC GATGGGCGGC TACGCCGGCT GGGTGGACAA CATCGAGGCG
ACATCCGGGC ACGATGCCGA ATTGTGGCGC TGTGGCATGC TCGCACTCGA CGTGCCGTTC
CCCGACGAGG CGCTGCGCTG GTGTAGCGCC CACGGGATAA GGGGGGAGCC GGGCTGCCCG
GAGATGCAGA ACCTCGAGCG CGATGTCTGC ACGGGAAATC CGCTCTGGCT CCCCGGCATC
GCCCAAGTAC GTAATCCCCG GCTGGTGGCC GCGCTGCAGG CTGCGGTGAC CAGAACCGGT
GGCACGATCC GCGAACACTG CCCGGCAGTC GGCGTGGTGC GTGATGGCCG ACGCGTCACG
GCGATACGGA CTGAAGCGGA AACACTGGCG GCTGACAGCG TCGTGCTGGC GACCGGTGCC
TGGTCCGGGC TGGGACTCGA GGGCTTGGCC CCCATGCCGC AGGTACGCCC GATCCGCGGC
CAGATGCTGC TCTTCAAGCT CACCCCAGGC GCGCTCGAAA CCATCCTCTA TCGCAACGGG
CTCTATCTGA TTCCCCGCCG TGACGGCCAC GTGCTCGTCG GCAGCACGGT CGAGGACGTC
GGCTTCGACA AGTCGACCGA CGCGGCGACG CGCGCCCGAC TGCACGCCGA GGCGGCGGAA
CTCCTGCCGG CGCTGCGGCG TGTCGAGCCG ATCCGCCACT GGGCCGGGCT GCGCCCGGGC
TCGCCGGACA ATATCCCGAT CATCGACCGG CACCCGGATT ACGACAATGT CTTCGTCAAC
ACGGGGCATT ACCGCTACGG GGTGACGCTG GCGCCGGCTT CGGCCGAACT GTTGGTCGAC
CTGATGGAAG GTCGCACGCC AGCGCTCGAC CCCGCGCCCT ATCGCTGGCA CGCGGCACTC
GCGCGCGAAT GGCACAGAAC GCTGTAG
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| Protein sequence | MTGRTLVVGA GVSGLAVALA LLQRGHKVTL LERGTAGAES SWAGGGILSP LLPWDYPDPV
SSLALRAMGG YAGWVDNIEA TSGHDAELWR CGMLALDVPF PDEALRWCSA HGIRGEPGCP
EMQNLERDVC TGNPLWLPGI AQVRNPRLVA ALQAAVTRTG GTIREHCPAV GVVRDGRRVT
AIRTEAETLA ADSVVLATGA WSGLGLEGLA PMPQVRPIRG QMLLFKLTPG ALETILYRNG
LYLIPRRDGH VLVGSTVEDV GFDKSTDAAT RARLHAEAAE LLPALRRVEP IRHWAGLRPG
SPDNIPIIDR HPDYDNVFVN TGHYRYGVTL APASAELLVD LMEGRTPALD PAPYRWHAAL
AREWHRTL
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