| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1863 |
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| Symbol | |
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| ID | 3671528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1959533 |
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| End bp | 1960405 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637710562 |
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| Product | hypothetical protein |
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| Protein accession | YP_315621 |
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| Protein GI | 74317881 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACC TCCGCACCCG ACACCAAGCT GGCTTCGGCC TGGTCGAGCT CATGATCGGC
CTCGCGGTGG GCATGATCGT CGTGGCCGCC GCGATGAGCC TCTTGACCAC CACGATGAGC
AGCAGCAACG ACACCATCAA GATGGGGCGG CTGGATCAGG AGATGCGCCA GGTCATGACC
ATGCTTTCCC GCGACCTGCG GCGAGCGACG ATCTGGGATC CAGCGGCGGA AGTCACCCGC
ATTCGCCTGA CCGATCCGCT GACCTTGAGC GGCACGACCG GAACCGTGAC GGTGACGAGC
AGCGCCGGCA ATCTCGGAGA CATCGGAACG AAGGCAGAGG GGGGAACCCT CGTTTACAAA
AACGGCACGA CCGTCTATCG CGGCAGTATC ACGAATTACA ACAGCGGCAG TTTCAGCGTG
ACGCTCACCG GCACCTGGCC CGCCAGCGTC ACCAACGCGG ACGGCGTGCC GGCGACCAGT
TGGAACATCC TGCGTCCGGA ATCCACCCTG ATCCACACCA CGAACTGCAT TCTATTTGCC
TCCGACACCG ACGCCAGCGG GACCTACGCC AACGGCGAGC GGCTCGGCTA CCGCCTCGAT
ACGACCGAGA ACGCCGTGGA AGTCCGTACG TCTGCAAGCA GCGGCGACAC CTGCACTTCG
GGCGGTAGCT GGGAAAACCT CACCGACGAA AACGTTGTCG AGATCGACGT CTTCACCGTC
ACCAACAATT CCCCTGTCAC GCTCACGAGC TCGGGTTTTT CCATCGACGT GCGCGAATTC
ACGATCAAGA TCACGGGCCA CCTGAAAGCC GACCCCGGCG TCGAGCGGAC GCTTCAGGAA
ACCATTCGTG TCCGCAACGA CAGATTGAGC TGA
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| Protein sequence | MLNLRTRHQA GFGLVELMIG LAVGMIVVAA AMSLLTTTMS SSNDTIKMGR LDQEMRQVMT
MLSRDLRRAT IWDPAAEVTR IRLTDPLTLS GTTGTVTVTS SAGNLGDIGT KAEGGTLVYK
NGTTVYRGSI TNYNSGSFSV TLTGTWPASV TNADGVPATS WNILRPESTL IHTTNCILFA
SDTDASGTYA NGERLGYRLD TTENAVEVRT SASSGDTCTS GGSWENLTDE NVVEIDVFTV
TNNSPVTLTS SGFSIDVREF TIKITGHLKA DPGVERTLQE TIRVRNDRLS
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