Gene Tbd_1835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1835 
Symbol 
ID3671500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1934226 
End bp1934954 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content69% 
IMG OID637710534 
Producthypothetical protein 
Protein accessionYP_315593 
Protein GI74317853 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.292483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGG TAGTGTCCGA CGAAATCCTG CAGGCTTTTG TCGACGGGGA ACTCAGTGTT 
CCCGAGAGCG AGGCGCTCGT TGCGCGCATG CGCGAGGACA GCGAACTGGC GCAGCGCGTC
TGCAGCCTTC GCAGCCTGAA GAGCATGGTG CAACTCGCGT ACGCGCGGCC CCCGGGGCCG
GCCCGCAGCG AGCGCGCCGT GCCCCGCCGC CAGCTGGCGC GGCGCTGTGC CTTCGGCTGT
CTCATGCTCG CGGCCGGTAT CGGAGGCTGG GCCTTGCGCG GCGTCGACAT CGACACCGCG
GCCGCGGCGC GCCTGTTGGC CTTGCCGGAC GGGTATCAGG TCGTCAGCCT GGCGCGCGAG
GTCGATCCGA ACCGGGTCCT GCTGCATCTC GACTCCGCCG CGCCCGAGCG GATGCGTGCG
GTGCTCGACC GCGCGGAACG GCTGCTCGAC GAGGCCGAAC GGGAACGGCG CCCCCTGGAA
CTCGAAGTCA TCGCCAACAG CCGTGGGATC GAATTGCTGC GCGCGGGTCA CAGCCCCTAT
GCCGAACGCG TGGCGCGCAT GACGCAGCGG CATGTCAACC TGCAATGGGT CGCGTGCGGC
CAGTCGATCG CGCGTTACAG GAGTGAGGGT CAGCGGGTCG AACTCCTGCC TCCTACGCGC
ACGGCGCCGA CCGCGATCGG CGAAATCGTC ACCCGCCTGC AGCAGGGGTG GACCTACATC
CGGGTCTAA
 
Protein sequence
MKSVVSDEIL QAFVDGELSV PESEALVARM REDSELAQRV CSLRSLKSMV QLAYARPPGP 
ARSERAVPRR QLARRCAFGC LMLAAGIGGW ALRGVDIDTA AAARLLALPD GYQVVSLARE
VDPNRVLLHL DSAAPERMRA VLDRAERLLD EAERERRPLE LEVIANSRGI ELLRAGHSPY
AERVARMTQR HVNLQWVACG QSIARYRSEG QRVELLPPTR TAPTAIGEIV TRLQQGWTYI
RV