| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1789 |
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| Symbol | |
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| ID | 3671453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1889047 |
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| End bp | 1890699 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637710487 |
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| Product | putative alpha-L-arabinofuranosidase |
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| Protein accession | YP_315547 |
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| Protein GI | 74317807 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0379328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAG TTACCGTACG CACCCGTCGC GGAATAAAGT CAGGTTTGAC GGCGACAGCC
ACACGTTCCG TCCGAACCAG CGCCTCAGCG CTCATATTGT GGGGGGGATT GCATGTGTCT
GCCGACGCAG CGGAGCAAAC GGCTTCGCAG TGGAAGCTGC CGCGCGCTGT TCAGATTCAG
CGGTCACAAG AGGTGCTGAT CGAGGTAGAC CCTAACAGTG TCATCCGAAG TGCCGTTCCC
GCTGCCCTGT TCGGTTTCAA TATTCCTTGG ATGAACTTTC AGCGGGGATA TTGGCGGGAG
AACCAAGTGA GGCCGGAGGT CATTGCGTGG CTCAAACCGT TTTCCGGCGC CGTATATCGG
TACCCCGGCG GGGAGTGGTC AAACTGGTTC GAGTGGGAAA AGGCCGCGGG CCCGGGATCC
TCGAGGCCCG AGCAGTATAC GACCTTCGGA TCCACTAAAG CGGAATTCGG TTTTGATGAG
TTCCTCGACT TTGTAAAAGC CGTGAATGGG GTGCCTCTGG TGACGGTTAA TCTCAAGGGT
ACAAAGGGGG CTCCTTGGAG TGACCAGCAA GCGGTGGAGA GCAATGTTGA ATGGCTCCAA
CATTCTGTTC AGCGTGAGGG AAGAGCGGTT GCACGTGGTA ACGCGCAGTT CTGCCAAACG
GGAACAAAGT GTCCTGTCGA GTGGTGGGAA CTGGGTAACG AGCTCGATTG GGGCAAAGGC
GCTTGGACAC ATACCGAGTA CGTCAACCGG GCGCGGGAAG TCGGGCTCGC GATGAAAAAT
ATCGATCCGG CCATCAAGCT TATCGCTCAC ACAACGAGTT CGCCGTGGAG CACAAAACGC
GTTATCGGGG AAAAGCCGAA GGCTAGGGAT TTCGATAGCG CCGTCGGCGC TGGGTTAGGA
GATCTTGCCT ATGGATATGC CTACCATCCC TACTATGACG GGATCAGTAT TCCCGCTGCA
AATCACTACA TGGAGCGCGC GATTAATTAT TTGCGGCCTA CTGCATCGAC TGGCAAGCCT
CCTCCCATAT TTGTCACGGA GCACGGCCGG TGGCCGAACC AACCCAAGTT CGGCAAGTGG
GAAACCACTT GGATAAAAAC CGGAAATTTA GGCGGGGCAG TCTCGACTGC GGACTTCCTT
CTCTCCCAAA TGGTGATTCC GGATGTACGA GCCGCCATGT GGCATTCGCT CGGGGCGCGA
GGGCCGTGGC AATTGTTCTA TCTTGACGCG GCCGCCGATG CTCTTTATCC AAACGTCGTT
TATTGGGCAT TACGGGTGCT TCGCGAGGGG TTAATTGGCG ACGCTCTAAA GGTGAGCGTT
TCTTCTCCTA ACACAAGCGG TTATCGCGGC GGCTACGATG TCCGTGCCGT ATTCATGCGC
GACAGTACGC ACACACGTTA CAGCTTGCTA ACGATTAATC GCGCTGAGAA AGAGCAGAAA
GCGCGCTTGC TCTTCCCGGA GTGGGCAGGC CGCAAGGTAA AGGGGCAACA GTACTACGTT
AGTGGCGACA GTGATGCGCT CGCGAACACG AAAGAACGCA AAAACGCTGT GACTATGCGG
AGCCGTGCCG TCGGCCTCCG ATTTGACGAC GCAGGTCAGG CCGAGATTAG CCTCCCAGCG
TTTAGTGTGT CGAGTATCGT GATTACGCCT TGA
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| Protein sequence | MQTVTVRTRR GIKSGLTATA TRSVRTSASA LILWGGLHVS ADAAEQTASQ WKLPRAVQIQ
RSQEVLIEVD PNSVIRSAVP AALFGFNIPW MNFQRGYWRE NQVRPEVIAW LKPFSGAVYR
YPGGEWSNWF EWEKAAGPGS SRPEQYTTFG STKAEFGFDE FLDFVKAVNG VPLVTVNLKG
TKGAPWSDQQ AVESNVEWLQ HSVQREGRAV ARGNAQFCQT GTKCPVEWWE LGNELDWGKG
AWTHTEYVNR AREVGLAMKN IDPAIKLIAH TTSSPWSTKR VIGEKPKARD FDSAVGAGLG
DLAYGYAYHP YYDGISIPAA NHYMERAINY LRPTASTGKP PPIFVTEHGR WPNQPKFGKW
ETTWIKTGNL GGAVSTADFL LSQMVIPDVR AAMWHSLGAR GPWQLFYLDA AADALYPNVV
YWALRVLREG LIGDALKVSV SSPNTSGYRG GYDVRAVFMR DSTHTRYSLL TINRAEKEQK
ARLLFPEWAG RKVKGQQYYV SGDSDALANT KERKNAVTMR SRAVGLRFDD AGQAEISLPA
FSVSSIVITP
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