Gene Tbd_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1750 
Symbol 
ID3671335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1840872 
End bp1842263 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content68% 
IMG OID637710442 
Productmulti-sensor Signal transduction histidine kinase 
Protein accessionYP_315508 
Protein GI74317768 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.810132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCGC TGTCGCTGAC CGCCCGGATC AGCGCGCTTT TCGCCGTGGC GGCGACCGTG 
GTCCTGCTCG TCACCGCGTA TTTCCTGACC CAGGCGGTGG AGGCCCATTT CAAGGCCGGA
GACCGCCACG AACTCGACGG CAAGCTCGAA CTCGTCCGCA GCCTGTTCGC GCGCGCCGAC
ACGCCGGAGA AACTGGCCGC GCTGCCGCAC CGGCTCGACG ATGCCCTGAT CGGTCACCAC
GGACTCGCCG TGGCCGTGAC CGACGCGGCA GGCGAACGCT GGTTCACGAC CTCGGGTGCG
ACGTTCCCCG ACACGCTGCT GCGCGACTGC CAGGCCCGGC CGGCCGCCTG CACCTCGGGA
AGCCTGCGCG AGTGGGAACA CGCCGGAAGA CCTTACCGCG GCACGGCGGT CGCGATGCGG
ATGCCGCAGG GTGGGACGTA CACCGTGGCC ATCGCGCTCG ACATCGCCCA CCACGCCGAG
TTCATGACCA AGGCGCGCTC GGTGCTCGGC GTGGCCATCG TGTTGGCGGC CCTCGCGACG
GCCGGGCTGG GATGGGTCGT CACCCGCTGG GGGCTTTTTC CCTTGCGCCG CGTAACGGCG
ACGGTGGCCG GCATGTCGGC CAAGCATCTG GCGGACCGCC TACCGACCGC GGGGCTGCCG
GCCGAACTGC AGCCGCTCGC CTCCGCCTTC AACGCAATGC TCGCGCGCCT GGACGATTCG
TTCCGGCGGC TGTCCGCGTT CTCCTCCGAC ATCGCGCACG AGCTGCGCAC GCCGATTTCC
AACCTCATGA CCCAGACCCA GGTCGCGCTC TCCAATGCCC GCGGCAACGA GGAATATAAG
GAAATCCTGT ACTCGAATCT GGAGGAGTAC GAGCGCATGG CGCAGATGGT CGGCGACATG
CTCTATCTCG CGCAGGCCGA CCACGGCCTG CTCAAGCCGG GCCTCGGCGT GGTCGACCTC
GCGAGTGAGA CCCGCGATCT GTTCGACTAT TTCGAAGCGT GGGCGGAAGA GCGTGGCGTG
TCGCTGGCGC AGGCCGGCGC AGCTTCGGTG CCCGGTGACC GCCTGATGCT GCGGCGCGCA
CTCAGCAACC TGCTTGCGAA CGCGATCCGT CATACACCAG CCGGTGAGGC CGTGACGGTG
TCGTTGGCGA TGCACGGCGG ACAGGCGGAA ATATTCGTCG ACAACCCCGG CATGCCGATT
CCGGCGCAAC ACCTTCCCCA TCTCTTCGAC CGCTTCTACC GCGTCGACCC GGCGCGCCAG
CGCAGCGGCG ACGGAGCGGG ACTTGGCCTT GCCATCGTGA AATCGATCGT CGAAGCGCAC
GGCGGCTCGA TTGGCGTCAC CTCAACCGCG CAGAGGACGC GCTTCCGTCT CGTCCTACCG
GCGGAGGGGT GA
 
Protein sequence
MRPLSLTARI SALFAVAATV VLLVTAYFLT QAVEAHFKAG DRHELDGKLE LVRSLFARAD 
TPEKLAALPH RLDDALIGHH GLAVAVTDAA GERWFTTSGA TFPDTLLRDC QARPAACTSG
SLREWEHAGR PYRGTAVAMR MPQGGTYTVA IALDIAHHAE FMTKARSVLG VAIVLAALAT
AGLGWVVTRW GLFPLRRVTA TVAGMSAKHL ADRLPTAGLP AELQPLASAF NAMLARLDDS
FRRLSAFSSD IAHELRTPIS NLMTQTQVAL SNARGNEEYK EILYSNLEEY ERMAQMVGDM
LYLAQADHGL LKPGLGVVDL ASETRDLFDY FEAWAEERGV SLAQAGAASV PGDRLMLRRA
LSNLLANAIR HTPAGEAVTV SLAMHGGQAE IFVDNPGMPI PAQHLPHLFD RFYRVDPARQ
RSGDGAGLGL AIVKSIVEAH GGSIGVTSTA QRTRFRLVLP AEG