| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1747 |
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| Symbol | |
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| ID | 3671332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1837091 |
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| End bp | 1838782 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637710439 |
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| Product | hypothetical protein |
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| Protein accession | YP_315505 |
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| Protein GI | 74317765 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.47098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.840597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGTTG TCAATCCAAG GTCGGCTTTC GCGGCATGGA CCCTCGCGGT GCTGCTGGTG
TCGATCGCGT CGTCCGTCCT TGCGGGTGGC GGCGACGACC ACAGCCACGG CCCCGAGGTC
GCGTTGCCCG TCCAGATCGA TACGGGGGGT CGACGCTTCG AGTTGACCTC GCCCGAGGTC
GAACTCGCCG GCGAACTCAA GGACGGCAGG CTCAGCGTCT ACGCCGACCG TTATGCGACC
AACGAGCCGA TTCTCGACGC GAAGATTCAA CTGGAAAGCG GCGAGCGCAA GCTTCCGCTG
CACGCGACCG AAGACGGCCG CTACGAGGCG ACGGCGGACT GGCTCAAGCA GGCCGGCACC
TACGAAATCG TCGTGAGCGT CGAAGCGGAG GGGCTCCAGG ATTTGCTGGT CGGCACACTC
GAGATACCGC CTTCGCCGGC CGGGACCGAG TCCGGTCGTG ACTGGCTCGA GTCCGGGAAA
TGGGCGGCGG CCGGCCTTGG CGTGTTAGTG GCGCTGCTGC TTCTCGGACG GCGCGTGCGC
CGCCGCCGGA ACACGACACT GGCGCTGGCC TTGCCCGTGT TCGCCGCCGT GGCGCTCGCG
GCCCACAGCG TGCCCGGTTT CGCCCACGGC GACGACGACC ACGGTGAGGA AACCAAGCCG
GCGACGATGC CGGCCGCGGG CGTGGCCCGG GGCGGGGCTT CGGCGAAGCG GCTGCCGGAC
GGCGGTGTCT TCGTACCCAA GGCCGTGCAA CGGCTGCTCG GTATCCGGAC CGTGCTCGGC
GAGCCGCGCG ACATCGCCAG GACGGTCGAA CTCAACGGCC ACGTCATGCC CGATCCGAGC
TTCAGCGGGC GGGTGCAGTC GAGCCAGTCG GGGCGCGTCG CCCAGCCGAA GGGCGGATTT
CCGGCGATCG GCATGAAGGT GCGCAAGGGC CAGGTCCTCG CTTACGTCGA ACCGGCGGCA
AGCAGCATCG AGAAGGGCAA TCAGCAGGCG CAACTCGCCG AGCTGGCGAG CGCACTCGGG
CTTGCCGAAC GGCGCGCCGC ACGGCTCGAG CAGCTCGTCG GCAGCCTGCC GCAAAAGGAG
ATCGAGGCGG CCCGCGCCGA AGCGGTGAGC CTCAGGGCGC GCAAGGCGGC GGTCGCGGCG
AGTCTCTATC AGCGCGAAGC CTTGCGCGCG CCGGTCGCGG GCGTGATCAG CCAGGCCGCG
GTGGTCGCGG GACAGGTCGT CGAGGCGCGC GAAGTCCTGT TCGAGATCGT CGATCCGACC
CGCTTGCGCG TCGAGGCGGT CGCCTACGAC TCCGCGCTCT CGGGGCAGGT GGCGGGCGCC
GCCGGCACGA CCGCGGGCGG TGAACCGCTC GCGCTAGCGT TCATCGGCCA GAGCTATCAA
CTGCGCGAAC AGGCCTTGCC GATGCAGTTC GCCGTCAAAC CGCCGGTGCC GGTGCTGAGC
GTCGGCCAGC CGGTGAAGGT GTTCGTCGAG ACGCGGCAGA CGGTCCGCGG CGTCGCGCTG
CCGCAGACGA GCCTCACCCG CAACGCCGGC GGCGAGACGA CTGTCTGGGT GCACGCATCG
GCGGAGCGCT TCGTGGCCAA GCCGGTGCGC GCGCAGGCGA TCGACGCCGA TACCGTCGCG
GTCGTCGAGG GCCTGCATGA AGGCGACCGC GTCGTGACCC AGGGCGCGGC ATCGCTCGCA
CAGATCCGCT AG
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| Protein sequence | MIVVNPRSAF AAWTLAVLLV SIASSVLAGG GDDHSHGPEV ALPVQIDTGG RRFELTSPEV
ELAGELKDGR LSVYADRYAT NEPILDAKIQ LESGERKLPL HATEDGRYEA TADWLKQAGT
YEIVVSVEAE GLQDLLVGTL EIPPSPAGTE SGRDWLESGK WAAAGLGVLV ALLLLGRRVR
RRRNTTLALA LPVFAAVALA AHSVPGFAHG DDDHGEETKP ATMPAAGVAR GGASAKRLPD
GGVFVPKAVQ RLLGIRTVLG EPRDIARTVE LNGHVMPDPS FSGRVQSSQS GRVAQPKGGF
PAIGMKVRKG QVLAYVEPAA SSIEKGNQQA QLAELASALG LAERRAARLE QLVGSLPQKE
IEAARAEAVS LRARKAAVAA SLYQREALRA PVAGVISQAA VVAGQVVEAR EVLFEIVDPT
RLRVEAVAYD SALSGQVAGA AGTTAGGEPL ALAFIGQSYQ LREQALPMQF AVKPPVPVLS
VGQPVKVFVE TRQTVRGVAL PQTSLTRNAG GETTVWVHAS AERFVAKPVR AQAIDADTVA
VVEGLHEGDR VVTQGAASLA QIR
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