Gene Tbd_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1722 
Symbol 
ID3671305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1807788 
End bp1808840 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content65% 
IMG OID637710412 
Producthypothetical protein 
Protein accessionYP_315480 
Protein GI74317740 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.930623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTC TACATTCCGC CCTGCGTTTT CGCGTCAACT ATTTTTCCGA TCTGGGCCGC 
CATCAGGTCG TCCTCTGGGC TCCGGGCGAC ACGCCGCCCG TCGATGCGCA GGTCGACGTC
GGCCCGAAGA TCGAGCACGA AGTGCCGACC GAGGTCTTTC GCAGCGATAT CGCGCCGCTT
CAGGTCGGGC GTTTTTATCC CTCGCAACTG CTGCACGCCG ACGACGCGCC GGGCCCGATG
TTCCGCGTGA TGAAGCGGGG CGACACGAGC TTCGTCGCCA ACTTCAGCCA TCCGCTGCAG
GGCCGGATAT TCAGCATCGA CAGCGGCAAG AGCGACGTCT CCACCGAGCC GGTTGGCCAA
GTCGGCCAGT TGCTGGAATG GAGCGGCATG GAAACCCAGA TGCAGACGCC GACCGAGTTC
GAGCGCGCAG ATTCGTTCCA GCGCGAGGAC GAAAGCCCCG ACGCCGAGTT CTACCGGCAG
GCGCGCAAGG TCGCCCACGT CGACGCCGTC TGCGCGCGCC GCATCCAGGC GCTGTACCGC
ACCGTCCTGC CGGAAAACGC CCGGGTGCTC GACCTCATGG CCGGCTGGCG CTCGCACCTG
CCCGACACCG TACAATCGGC GGCGGGCCTC GGGCTCAACG CCGAGGAACT CGACGACAAC
ACGCAGCTTG CCGAGCGTAT CGTCAAGGAC ATCAATGCCG ACCCGCAGTT GCCGTTCGCC
GACGCGAGCT TCGACGCCGT GGTGTGCACG CTGTCCTTCG AATACCTGAC CCAGCCGCAC
AAGATCGTCG CCGAGGCCAA ACGCGTGCTG AAGCCGGGCG GCATGTTCGT GGTGACGCTC
TCGAACCGCT ACTTTCCGCC CAAGGTGATC AAGCTCTGGA CCGAGCTGCA TCCGATGGAG
CGCATGGCCT GGGTCGGAAC GTTGATCAAG CGCGCGGGTT TCAAGAAGGT CGAAACCTAT
GTCGAGCGCG GGCTCAAGCG CGCGCAGGAC GACCGCTACG CGGCGCAGCT CCCGGAATCC
GATCCGCTGT TTGCGACCTG GGGCGTAGCC TAA
 
Protein sequence
MKLLHSALRF RVNYFSDLGR HQVVLWAPGD TPPVDAQVDV GPKIEHEVPT EVFRSDIAPL 
QVGRFYPSQL LHADDAPGPM FRVMKRGDTS FVANFSHPLQ GRIFSIDSGK SDVSTEPVGQ
VGQLLEWSGM ETQMQTPTEF ERADSFQRED ESPDAEFYRQ ARKVAHVDAV CARRIQALYR
TVLPENARVL DLMAGWRSHL PDTVQSAAGL GLNAEELDDN TQLAERIVKD INADPQLPFA
DASFDAVVCT LSFEYLTQPH KIVAEAKRVL KPGGMFVVTL SNRYFPPKVI KLWTELHPME
RMAWVGTLIK RAGFKKVETY VERGLKRAQD DRYAAQLPES DPLFATWGVA