Gene Tbd_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1714 
Symbol 
ID3671297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1802012 
End bp1802422 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content61% 
IMG OID637710404 
Productferric uptake regulator family protein 
Protein accessionYP_315472 
Protein GI74317732 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.382705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTACA CGCGCGACAA CATGGCCGGC CTTTTGCGCA GCCACGACAT CAATCCGACC 
CACCAGCGGA TCGAGATCGC GCACGCCCTG TTCTCGCGCC ACGAGCATCT TTCGGCGGAC
CAGGTCATGG CGATCGTCAA TACGCGCCAC TCCGAAACCT CGAAGGCGAC GGTCTACAAC
ACGCTCAAGC TGTTTCTCGA GAAAGGCCTG GTGCGCGAGG TGATCGTCGA CCCGAGCAAG
GTGTTCTTCG ACCCCAACAC GACGCCGCAC CATCACATCT ACGAGATCGA CAGCGGAAAG
CTGTCCGACA TCGACGCCGA ACACATCCAG ATATCGGGCC TGCCTCCTCT TCCCCCGGAC
ATGGTGACGG AAGGCATCGA CCTGATCGTG CGCGTGCGCC GCAAGGCCTG A
 
Protein sequence
MHYTRDNMAG LLRSHDINPT HQRIEIAHAL FSRHEHLSAD QVMAIVNTRH SETSKATVYN 
TLKLFLEKGL VREVIVDPSK VFFDPNTTPH HHIYEIDSGK LSDIDAEHIQ ISGLPPLPPD
MVTEGIDLIV RVRRKA