| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1679 |
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| Symbol | |
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| ID | 3673066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1767440 |
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| End bp | 1768510 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637710368 |
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| Product | phage integrase family site specific recombinase |
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| Protein accession | YP_315437 |
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| Protein GI | 74317697 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.229259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0687632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCTA GCGTGAATGC AAAAACCCGG AAACCTACGG CCAAAGCCCG CGATGGGGTC
AAGGTCGAGA AGAACATTTA CCGGCGAGGG GAGTACAGCT ACCAGGTAAA GATGATGTTT
GGCGGCCATG CCGTCGTGGA AACCTTCGAC ACCCTGCCAG AGGCTCGCGC CTTCCGGGAC
AGCAAAAAAG CAGCAAGCGT CATTGACCCG GACTTCAAGC GGGTGCTGGA GAGCCGCATC
AAGAAGACCG AGGCGGCCAG TTCAAGCCTG GGCTGGCTGC TCAATCGGTA TGAAGCGGAA
GTCACCTCGG GGAAGAAAAG CGCTACATCC GAGCGCTACC GGATAGGCAA GCTGAAGCGG
TACCGCATCG CCGGGCTCAG TATCTACACC ATCAGTGCTG ACGATGTGGC CGAGTTCCTT
GGCGATCTCA AGGCTGACGG CGTGGCCTCT CCAGGTCAGC GCAAATACTG CGCCCTCCTT
TCACACGTCT TCAATACGGC CGCAAAGCGC TGGCGGCTGA AGGTATCGAA CCCGATCACC
AGCCTGGAAC TTCCTGCCGG CGGCAAGGCT CGCGATCGCC GCCTAGAACC GGGTGAGGCC
GACACGCTGC TTGCTGAACT GGACAAGGAA AACGCCTACG CCGGTGCCTA TGCTCGCCTC
GGCATCGAGA CCGCCATGCG TCGAGGCGAG CTGCTTGGCC TGGCGTGGGA CGACGTGGAT
CTGAAAAACA GGGTGGCCGA GCTGCGCGAC ACCAAGAATG GCGAGGGCCG GCGCGTGCCG
CTATCCAGGG CGGCAATCAA GGTCCTGCGC GCCCTCCCCC GCCCTCATAA GGGCCCCGTT
CTCCCCATTG GGGCTTCCGC CTTACGCGGC GCTTGGGGTC GGGCGAAAGA GAAGGTGGGG
ATCAAGGATT TGAGGATCCA CGACCTGCGG CACGAGGCCA CCTCGCGCCT GTTTGAGAAA
GGCGTGTTTG ACAGCATGGA AGTCGCCAGC ATCACCGGTC ACAAGACCTT ACAAATGCTC
AAACGGTACA CGCACCTACG GGCCGAGGAT CTGGCGAAGA AGCTGGGTTA G
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| Protein sequence | MNSSVNAKTR KPTAKARDGV KVEKNIYRRG EYSYQVKMMF GGHAVVETFD TLPEARAFRD
SKKAASVIDP DFKRVLESRI KKTEAASSSL GWLLNRYEAE VTSGKKSATS ERYRIGKLKR
YRIAGLSIYT ISADDVAEFL GDLKADGVAS PGQRKYCALL SHVFNTAAKR WRLKVSNPIT
SLELPAGGKA RDRRLEPGEA DTLLAELDKE NAYAGAYARL GIETAMRRGE LLGLAWDDVD
LKNRVAELRD TKNGEGRRVP LSRAAIKVLR ALPRPHKGPV LPIGASALRG AWGRAKEKVG
IKDLRIHDLR HEATSRLFEK GVFDSMEVAS ITGHKTLQML KRYTHLRAED LAKKLG
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