Gene Tbd_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1570 
Symbol 
ID3672050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1654205 
End bp1655479 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content66% 
IMG OID637710256 
Productcyclic nucleotide-binding domain-containing protein 
Protein accessionYP_315328 
Protein GI74317588 
COG category[S] Function unknown
[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGC CCGCCCTGCC CCCCGTCCGC GGCCCGCTCT CGCGGATCGT CCAGCTCGGC 
TACACGACGG CGCGCCTGTT CACGCAGAAC GGGCTGCAAA ACCACGCCGC GGCCACCGCC
TTCTATTTCC TGCTCTCGGC GACTCCGCTG CTGCTGCTGC TCAGCTATGG GCTGACCCTG
CTCGGCCAGA TCGCCGAGAA TTCGGTTCCC GCGACGATCC TGCTCGCCGC GCTCTACGAG
CAGATGCGAC TCGACAGCCT GACCGAGCTG GGCTTCATTC CGAGCCAGAC CGAACTCACC
GCCGGCAGCG TCGGCCTCGT CACGCTGCTG CTGTCGTCCC GCGGCCTCGT CAACACGATG
CAGGGCGCGT TCCGCATCAT CTTCCCGGCG CGCGAGAAAC GCAGCTTCGT CGGCTCGTGG
ATCCTGCCGC TCGTCGTCCT GCCGCTCCTG TTCGCGCTAA TGGGTGTCGC CGCGCTCGCC
CAGGTGACGC TGACGTTTCT CGGGCAAAAC GACTTCATCG GCACCGGCAA CGCGCGCGTG
TTGCAGGTGC TCAATTCGCT GTTCGGCTTC GCCATGGTCT GGGCGCTGCT CTTCACCGCC
TACTGGCGGC TGCCGCGCCG CCACCCGCCC GCACGCGTCG CCGCGGTGTT CGCGCTCGGC
GCCATCGCCA GCCTTGGTCT CCTGCTTGTC CTGTTCGGCG CCTTCTTCGA ACTCGAAAAC
TACCTGAGCC TCTACGGCGC GCTCGGCGGC GTCGTCTTCG TCCTGATCGG CGCCTACTTC
GCGTTTCTGC TACTGTATTT CTGGGCCCAG GCCCTGTACG CCTACGGCAA GGCCGACATC
ATCGCGCTCG AAAAACTGTT CCTGAGCCAT AGCGGCGACG GCGATCCGCT CGAGCGCTAC
GTCTTCGCCG ACAGCCATCC GCTGATGGAA AAATACGGCC AGATCCATCC CGCCGGGCAC
GCCCTGATCG AGGAAGGCGA CACCTCGCAC ACCGCGTATT TCCTGTGCTC GGGGCACGCC
GCCGTGTACA AGAAAACCGA AGCAGGCCGC CGCCGCCTCA ACGAGCTGCA GCAGGGCCAG
CTCTTCGGCG AAATGGCCTA CCTGCTCAAC GAGCCGCGCA CCGCGTCGGT CGTCACCGAA
AGCGAAGTCA CCGTGCTCGC GCTGCCGCCG CAAATTCTCG AAGAGCTCAT GCAGCACTCC
GCCCTGCTCT CGCGCCGCAT CATCGCGACG CTATGTCTGC GGCTCGAACG GATGAACGCC
GAACGGGCGG CGTAG
 
Protein sequence
MRLPALPPVR GPLSRIVQLG YTTARLFTQN GLQNHAAATA FYFLLSATPL LLLLSYGLTL 
LGQIAENSVP ATILLAALYE QMRLDSLTEL GFIPSQTELT AGSVGLVTLL LSSRGLVNTM
QGAFRIIFPA REKRSFVGSW ILPLVVLPLL FALMGVAALA QVTLTFLGQN DFIGTGNARV
LQVLNSLFGF AMVWALLFTA YWRLPRRHPP ARVAAVFALG AIASLGLLLV LFGAFFELEN
YLSLYGALGG VVFVLIGAYF AFLLLYFWAQ ALYAYGKADI IALEKLFLSH SGDGDPLERY
VFADSHPLME KYGQIHPAGH ALIEEGDTSH TAYFLCSGHA AVYKKTEAGR RRLNELQQGQ
LFGEMAYLLN EPRTASVVTE SEVTVLALPP QILEELMQHS ALLSRRIIAT LCLRLERMNA
ERAA