Gene Tbd_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1543 
Symbol 
ID3672023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand- 
Start bp1627747 
End bp1628361 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content71% 
IMG OID637710229 
Productthymidylate kinase 
Protein accessionYP_315301 
Protein GI74317561 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.145095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0739271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTC CCGGAAAATT CATCACCCTC GAGGGCGTCG ACGGCGCCGG CAAGAGCACC 
CACGTGGGCT TCGTCGCCGA GTGGTTGCGC GGGCAGGGCA GGGAGGTGAT CGTGACGCGC 
GAGCCGGGCG GAACCGCGCT CGGCGAGACG CTGCGCGAAC TGCTGCTGCA TCGCGAGATG 
GCGGCCGACA CCGAGCTGCT GCTGATGTTC GCGGCGCGGC AGCAGCACTT GGCCGAACTG 
ATCCTGCCTG CGTTGGCGCG CGGCGCCTGG GTCGTCTCCG ACCGCTTCAC CGATGCGAGC 
TACGCCTACC AGTGCGGCGG GCGGCGCATC GCGGCCGAAC GCATCGCGGC GCTCGAAGAC 
TGGGTGCAGC GCGGCTTCGC GCCCGACCTC ACGCTGCTCT TCGACGTGCC CCCCGCGGTC 
GCCGAGGAAC GACGCTCGAG CGTGCGCGCG GCCGACCGCT TCGAGCAGGA GGCCGGCAGC 
TTCTTCGCGC GCGTGCGCGA CGCCTATCTC GTGCGTGCGC GTGCGGAGCC GCATCGCATC 
CACGTGCTCG ACGCGCGGCA GACGATCGAC GCCGTGCAGG CCGAAATCGC GCGGCTGCTG 
CAGGACTTGA CGTGA
 
Protein sequence
MSLPGKFITL EGVDGAGKST HVGFVAEWLR GQGREVIVTR EPGGTALGET LRELLLHREM 
AADTELLLMF AARQQHLAEL ILPALARGAW VVSDRFTDAS YAYQCGGRRI AAERIAALED 
WVQRGFAPDL TLLFDVPPAV AEERRSSVRA ADRFEQEAGS FFARVRDAYL VRARAEPHRI 
HVLDARQTID AVQAEIARLL QDLT