Gene Tbd_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1536 
Symbol 
ID3672015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1620819 
End bp1621568 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID637710221 
Productglycosyltransferase, group 2 family protein 
Protein accessionYP_315294 
Protein GI74317554 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.135524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAC ATGCCTACCA CGGCAGGCTT TCCGTGGTCG TACCCGTCAA GAACGAGCAG 
GACAACGTCG AGCCGCTGGT ACGCGAGATC GCCGCAGCGC TGACCGGCAG CGCGACCTTC
GAGATCATCT ACGTCAACGA TGGCAGTACC GACGCGACCC AGGCCCGACT CGAAGCACTG
AAGACCGAAT TTCCGATGTT GCGGGTGATC CGCCATCGCG CATCATGCGG CCAGAGCCGT
GCGGTGACAA CCGGGGTCGT GTCGGCACGC TACGAATGGA TCGCGACGCT CGACGGCGAC
GGCCAGAATG ATCCGGCCGA CATCCCGGTC TTGCTCGAGA CGCTCGGCGA CCCGACACAG
CCCGCCAATC TGGAGCTGAT CGCCGGCTGG CGTTCCAAAC GCCGCGACAC GGCGCTCCGC
CGGCTCTCGT CGAAGGTCGC GAACGCCGTG CGCTCGCGCC TGCTGCGCGA CGCCACCCCC
GACACGGGGT GCGGGCTCAA GGTGTTCGCG CGCGAGACCT TCCTGCAGCT GCCCAATTTC
GACCACATGC ACCGCTTTCT GCCAGCGCTC GTGATGCGTA ACGGCGGCGC CGTGCTGTCG
GTGCCGGTCC GCCATCGCCC GCGCGAGCGG GGCACTTCCA AGTACGGCGT GCACAACCGG
CTTTGGGTGG GAATCGTCGA CCTGTTCGGC GTTGCCTGGC TGCAGCGCCG CGTGCGGCTG
CCGCTGATCG AGCCAGACTC CGATCGCTGA
 
Protein sequence
MPKHAYHGRL SVVVPVKNEQ DNVEPLVREI AAALTGSATF EIIYVNDGST DATQARLEAL 
KTEFPMLRVI RHRASCGQSR AVTTGVVSAR YEWIATLDGD GQNDPADIPV LLETLGDPTQ
PANLELIAGW RSKRRDTALR RLSSKVANAV RSRLLRDATP DTGCGLKVFA RETFLQLPNF
DHMHRFLPAL VMRNGGAVLS VPVRHRPRER GTSKYGVHNR LWVGIVDLFG VAWLQRRVRL
PLIEPDSDR