Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1524 |
Symbol | |
ID | 3672003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1611291 |
End bp | 1612595 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637710209 |
Product | major facilitator transporter |
Protein accession | YP_315282 |
Protein GI | 74317542 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.472365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.129065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGCTG AATTGCGTCG TCCGCCGCCG GCCGCACTCG CCTGGCTGAC CTGGGGCCTG CTCGCGAGCC TCTATTTCGT CGGCTATTTC CAGCGCGTCG CGCCGGCCGT GATGGTCGAC GAACTGATGC GCGATTTCAG CATCGCCGCC ACCCTGCTCG GCAACCTCTC CGCAATCTAC TTCTATACCT ACGCCGCGAT GCAGATCCCG AGCGGCCTGC TCGCCGATGC CGTGGGGCCG CGGCGGACCG GCGCCGCGGC GGCGCTCGCC GCAGCGCTCG GCATCGTCGT GTTCGCGCGT GCCGACAGCC TCTGGCTCGC GGCGCTCGGC CGCGGGCTCG TCGGCGCATC GGTGGCCGTG GCCTTCGTCG CGTGCATGAA ACTCGCCGGC CACTGGTTCC CGGCCAATCG CTTCGCGACG GTGACGGGGG TCGCGCTGCT GATCGGCAAC CTCGGCGGCG TGCTCGCCGG CGTGCCGCTA TCGGAAGCCG TCGCAGGCAT CGGCTGGCGC AACGCCATGC TCGTCAGCGC GGGCGGCACC CTGTTGCTCG CCGCCGCGGT CTGGCTCTGG GTGCGAGACG ATCCGGGCGA GCGGAGCTTT GCGACTTATG CCCATCCCGA GGCCTTGAGC GGCGGTGGAA TGGCGCCGCT GCGCAGCCTG CGGCTCGTGC TCTCGGAGCG CGACACCTGG CTGCTCTTCT TCGCCGGCGG GATGATCGCC GCGCCTGTGT TGACCTTCGC GGGTCTCTGG GGCGTGCCCT ATCTGGTGCA GATCCACGGC ATGACGCGCA GCGAGGCCGC GGGCTTCACG ACGACGATGC TGCTCGGCTT CGCGTTCGGC GGACTGCTGC TTGGCAGCCT GTCCGACCGC CTGCAGCGCC GCAAGCTGCC CTATCTCGGC GCGGCGATCG TTCACGCCGG CGGCTGGCTC GGCTTTCTGT TTCTTCCGCA GGGGCCGGCG GCTGGCCTCT ACCTGTTCTT CGCCGTCATC GGCTTCTCGG CCGGCGGCCT CATCATCGGC TTCGCCTTCG CGCGCGAGGT CAACCACCCC GGTGCCGCCG GCACCGTCGG TGGCGTCGTC AACATGTCGG TTCTGGGTTT TGCCGCGATC CAGCAGAGCG GCGTCGGCTG GATTCTCGAC CGGCACTGGG CGGGCGGCGG GCTCGCCGGT GCGCGCGTCT ACGACGCCGC GGCCTATCAC GCCGCTTTTC TGTGGCTCGC CGTCAGCGCG CTCGGTGCGG TCGTCTGCGT CGCGCTGACG CGCGAGACCC ATTGTCGGCT GCGCTTCGAC GCGTCGCGCA GGTGA
|
Protein sequence | MGAELRRPPP AALAWLTWGL LASLYFVGYF QRVAPAVMVD ELMRDFSIAA TLLGNLSAIY FYTYAAMQIP SGLLADAVGP RRTGAAAALA AALGIVVFAR ADSLWLAALG RGLVGASVAV AFVACMKLAG HWFPANRFAT VTGVALLIGN LGGVLAGVPL SEAVAGIGWR NAMLVSAGGT LLLAAAVWLW VRDDPGERSF ATYAHPEALS GGGMAPLRSL RLVLSERDTW LLFFAGGMIA APVLTFAGLW GVPYLVQIHG MTRSEAAGFT TTMLLGFAFG GLLLGSLSDR LQRRKLPYLG AAIVHAGGWL GFLFLPQGPA AGLYLFFAVI GFSAGGLIIG FAFAREVNHP GAAGTVGGVV NMSVLGFAAI QQSGVGWILD RHWAGGGLAG ARVYDAAAYH AAFLWLAVSA LGAVVCVALT RETHCRLRFD ASRR
|
| |