Gene Tbd_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1518 
Symbol 
ID3671997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1606057 
End bp1606596 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content70% 
IMG OID637710203 
Producthypothetical protein 
Protein accessionYP_315276 
Protein GI74317536 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.473183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.32871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA GCCTGCTCGG CGCGGCGGCC CCGGGATTCG ATCGGCCGCT TGAGGTGCTG 
GAGGCCTGCC ATGCGCGCAT CCTCAAGCAA TGCGCGACCC TCGACAGGCT TCGCGCACAC
CTGCTCGAGC ACGGCGCCGA CGCCGAGGCG CGACAGGCGG CGCGCGCGAT CCTGACGTAT
TTCGATACCG CCGGCATGCA TCACCACGAC GACGAGGAGC GCAATCTCTT GCCGCTGCTC
GAGCAGGCAG GTGCGCCGGG CGCCTGCGAG CTGACTGAAC TCCTCGCACA CGAGCACGAC
GCGCAGGCGC AGCTATGGCG CCGCCTCCGA CAGCAACTCG AACAGATCGC AGGAGGTGCC
GCGGCCGGGC TCGACCCTGC CCTGACCCAA GCTTTCGTCG CGTCGCATCG CGCCCATCTC
GAATTCGAGA ACGCGCGTGT GCTGCCGCTC GCTCGTGCCC ATCTCGGGGC CGATGCGCTC
GAGCGGCTCG GGCGTGCGAT GGCCGCGCGC CGCGGCATCC CCTTCGAAGC CAGGTCGTGA
 
Protein sequence
MTASLLGAAA PGFDRPLEVL EACHARILKQ CATLDRLRAH LLEHGADAEA RQAARAILTY 
FDTAGMHHHD DEERNLLPLL EQAGAPGACE LTELLAHEHD AQAQLWRRLR QQLEQIAGGA
AAGLDPALTQ AFVASHRAHL EFENARVLPL ARAHLGADAL ERLGRAMAAR RGIPFEARS