| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1507 |
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| Symbol | |
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| ID | 3672920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1595584 |
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| End bp | 1596693 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637710192 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_315265 |
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| Protein GI | 74317525 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.122558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.193244 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATGC ACCATTCGGA CCGGGGCGAA CGCGCCTGCC GCCGGAAAAC CGACGAGGAG
GATGGCGCGT TCTGGGCCCC CGACCGCGGC GAAATCGTCA TCCAGTATTT CACCCGATAT
CTGTTTTTTT CGCTTTCGGT CGTCTACTTC TCGACCGTCG AAACCCTGCC GTCCGGGTTT
CTCGACATCG AGCAGTTGCT GCTCGCACTC GGCGCGTATT TCGTTATCAA CAGCTGGCTC
TTTCGTCAGG CGCTGCAAGG TCTCACGCTG CTGAAGATAC GCAGCGCGAT GAGCGCCGAC
CTCGCGATCG TCACGGTCTG CGTCGTCCAC GACCCCAATC TCATCCCGCC GTCGGCGCTG
GTCTATCTGA TGGTTCTGCT CGGCAACGGC ATGCGCTACG GCATGCGCGT CTTCGCCGAA
GTGCTCGGCG CCTCGTTCGT CTGCATGGCG TTCGCGTTCG CGCTACGCTA CCGCTTTGGC
GGCTTCGTCG TTACGGCCGG CGACGTGTTC TACGGCATCT TCTGGGTGAC ACTCGCGCTG
TACGCCTACA TCCTGACGGG CCGCCTCGAG GGGCAACGCC GCGAGCTCGA CCGGTGCAGC
CGCGTCGATG CCTTGACCGG CTTGCTGAAC CGCCACGGAC TGCTCGCCGC CGCCGACCGC
CTGCTCGGCG GTGCCGGCAA CGCGCAGCCC GCGACGGTGT TGTTCGCCGA CCTCGATCAG
TTCAAGTCGG TCAACGACCT TTACGGGCAC GGCGCGGGCG ACCGCGTGCT CGCGCAGTTC
GCGCAGATCT TTGCCGAATG CGCCGAGGAG GGCGTGTGCG GACGCTGGGG CGGCGACGAG
TTCGTCGCGA TCCTGCCGCC GCGCGACGCC GCGGCCGTAG CGAAGATCTT CGAGCAGATC
GACGCCCGCA TCGACGCCTG GAGCAGGAGC AATGCCCTGC CGCTGGCGGC GAGCCTCGGC
GTCGCCCAGG CGCCGCAGGA CGGCCACGAC CTCTTGACCC TGCTGTCGGT TGCCGACATC
CACCTTTATC AGAGCAAGTC ACGGCAGCCG GCTCAGGCTG GCGTGCCTGC ATTTTTCAGG
ACCGCGATCA ATGAACCCCA AATTACTTGA
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| Protein sequence | MAMHHSDRGE RACRRKTDEE DGAFWAPDRG EIVIQYFTRY LFFSLSVVYF STVETLPSGF
LDIEQLLLAL GAYFVINSWL FRQALQGLTL LKIRSAMSAD LAIVTVCVVH DPNLIPPSAL
VYLMVLLGNG MRYGMRVFAE VLGASFVCMA FAFALRYRFG GFVVTAGDVF YGIFWVTLAL
YAYILTGRLE GQRRELDRCS RVDALTGLLN RHGLLAAADR LLGGAGNAQP ATVLFADLDQ
FKSVNDLYGH GAGDRVLAQF AQIFAECAEE GVCGRWGGDE FVAILPPRDA AAVAKIFEQI
DARIDAWSRS NALPLAASLG VAQAPQDGHD LLTLLSVADI HLYQSKSRQP AQAGVPAFFR
TAINEPQIT
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