Gene Tbd_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1472 
Symbol 
ID3673585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1557582 
End bp1559003 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content70% 
IMG OID637710157 
Productmercuric reductase 
Protein accessionYP_315230 
Protein GI74317490 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.505901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCCG AGACCGACCA CGACAACTTC GACGCGGTGA TCGTCGGCGC CGGACAAGCC 
GCGGCGCCGC TCGCCGTCGC GCTCGGCGCC GCCGGCTGGA GGACCGCCGT CGTCGAGCGC
CGGCACGTCG GCGGCTCGTG CATCAACTTC GGCTGCACGC CGACCAAAGC GATGGCTGCA
AGCGCACGCG TCGCCGCCCT CGCGCGCCGG GCGGCCGAAT TCGGCCTGCG GGCTGGCACG
GTCGAGGTCG ATTTTCCGGC CGTAATGCAA CGCGCGCGTG CGATCGTCGC GCGTTTCCGT
CGTCGCCTCG AGGCCTCGCT CGCAGGCGCC GACAATGTCG AACTGATCTT CGGTGACGCC
ATCTTCCAGG ACGCCCGCAC GCTCATCGTG CGGCGCCCGG ACGGCGAATC GCGCACGCTC
GCGGCAGCGC ACGTCTTCAT CAACACCGGC ACCCGCGCGG CGCTGCCGCC GATACCCGGC
CTCGAGCGGC TGCCGCTGCT GCACGACGAC GCGCTGCTCG CGCTCGAGAC GCTGCCGCCG
CATCTGCTCG TCATCGGCGG CGGTTACGTC GGGCTCGAAT TCGCGCAGAT GTTCCGCCGC
TTCGGCAGCG AGGTCAGCCT CATCCAGCGC GACGAACAAC TCGCGCCACG TGAAGACCCC
GACGTCGCCG AGGCGCTGCG CGAAATGCTC GTGGAAGACG GCGTCAAGGT GTACCTCGAG
GCGAAAATCC TCGACGCCGA CCGGGGGCGC AGCAGCGACG GCGACAGCAT CGCGCTCAAC
CTCAAGACGC CTACCGGCCC GTTGCGCCTG CTCGGCTCGC ACCTTCTCGT CGCCACCGGC
CGCAGGCCCA ATAGCGACGA CCTCGATCTC GCCGCCGCCG GCGTGGAGAC CGGTGCCGAC
GGCTACATCC GCGTGAACGA TCGGCTTGAA ACCAGTGCCG CCGGCATCTA TGCGCTGGGC
GACGTCAAGG GCGGACCCGC TTTTACCCAC ATCGCCTACG ACGACGCGCG CGTGCTGAAG
ACCAATCTGC TCGGCGACGG CGGCGCGAGC GTCGCGGACC GGCCCGTTCC CTACACGGTA
TTCACCGATC CGCAACTCGG ACGCATCGGT CTTAGCGAGC GTGAGGCCCG GCAGAGCGGG
CGCCGCGTAT TGCGCGCGCA CCTGCAGATG GCCCAGGTCG CGCGCGCGAT CGAGACGGGC
GAGGCCCGCG GCTTCGTCAA GGCGCTCATC GATGCCGACA GCGGAGAGAT CCTGGGGGCG
GCCGCGCTCG GGGCCGACGG CGGCGAACTG ATGGCGATGC TGCAACTCGC GATGATGGGC
CGCATTCCCT ACTCCCGCCT GCACGACGCG GTGTTCGCCC ACCCGACGCT CGCCGAATCG
CTCAACGCCC TCTTCGCCGC ACCGCAGCCG CTACCGCGTT AG
 
Protein sequence
MGSETDHDNF DAVIVGAGQA AAPLAVALGA AGWRTAVVER RHVGGSCINF GCTPTKAMAA 
SARVAALARR AAEFGLRAGT VEVDFPAVMQ RARAIVARFR RRLEASLAGA DNVELIFGDA
IFQDARTLIV RRPDGESRTL AAAHVFINTG TRAALPPIPG LERLPLLHDD ALLALETLPP
HLLVIGGGYV GLEFAQMFRR FGSEVSLIQR DEQLAPREDP DVAEALREML VEDGVKVYLE
AKILDADRGR SSDGDSIALN LKTPTGPLRL LGSHLLVATG RRPNSDDLDL AAAGVETGAD
GYIRVNDRLE TSAAGIYALG DVKGGPAFTH IAYDDARVLK TNLLGDGGAS VADRPVPYTV
FTDPQLGRIG LSEREARQSG RRVLRAHLQM AQVARAIETG EARGFVKALI DADSGEILGA
AALGADGGEL MAMLQLAMMG RIPYSRLHDA VFAHPTLAES LNALFAAPQP LPR