Gene Tbd_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1454 
Symbol 
ID3673567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1537707 
End bp1538939 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content72% 
IMG OID637710139 
Producthypothetical protein 
Protein accessionYP_315212 
Protein GI74317472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.415567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGC CTGCGCTCGA CGCCTTTGCG GGTTACGGCG TCGAGCTCGA ATACATGGTC 
GTCGCGCGCG ACACGCTCGC CGTGCTGCCG ATCGCCGACC GTCTGCTCGC GAGCGCCGCC
GGCCGCGCGG CCAGCGCGGT CGTGCGCGGC GGTTTCGGCT GGTGCAACGA AATCGTCCTG
CATCTGGTCG AGATCAAGAA TCAGGCGCCC GCCCCGGCGC TCGCGCCGCT CGCCGCCGGC
TTTCAGGCCG AGGTCGCCGC GATCGGGCAA TTTCTGCAGC CGCTCGGCGC GCGCCTCATG
CCGACCGGTA TGCATCCGTG GATGGACCCG CGGCGCGAAA CCCGCCTCTG GGCGGACGAT
CCGGCCGGCA TCTACCGCGC CTACGACCGC ATCTTCGACT GCCACAGCCA CGGCCAGGCC
AACCTGCAGA GCATGCAGCT CAACCTGCCC TTCGCCGACG ACACGCAATT CGCCCGCCTG
CACGCCGCGA TCCGGCTCGT CCTTCCGATC CTGCCCGCGA TCGCCGCGAG CTCGCCCCTG
GCCGATGGCC GTCCGGCCGC CCACCTCGAC GCGCGCATGG CCGCCTACGC CGGCGCCGTC
GCGCGGGTTC CCGCCGTGAT CGGCGAACTC GTGCCCGACA CGGCCACCGG CCGCGCCGAC
TATGTCGAAC AGGTGCTCGC GCCGATGTAC CGCGCGATCG CGCCGCTCGA CCCGGACGGT
GTGCTGCAGC ACGAATGGCT CAACGCGCGC GGCGCAATTC CGCGCTTTGA ACGCGACGCG
ATCGAAATCC GCGTGGTCGA CATGCAGGAA TGCCCCGCGG CCGACCTCGC GATCGCCGCG
GCGACCGCGG CGGCGGTGCG CGCGCTCTAC GACGCGACCT GGTCGTCGCT GTCCGAACAA
CAGGCGATCG CGACCCCCGT CCTCACGCGG CTGATGCACG CCTGCGTGCG GTACGGCGAC
GCGGCACTGA TCGACGACGG GCCCTATCTG CGGCTGCTCG GACTACCTGC CCACCCCGTC
GCGGCGGCCG AGGTCTGGCA GCACCTGATC GAAACCACCG GCGTCGGTCG CGCCGCGCCC
TGGCGCGAGC CGCTGCAATG CATGCAGCAG CAGGGACCGC TCGCGCGCCG GATCTTGCGC
GCCCTCGGGG CCGATGCGAC GCGGCAGCGC CAGCATGCGG TCTACGAAGC GCTCTGCGAT
TGCCTCGATG CCGGGCGGAT GTTCACGCCG TGA
 
Protein sequence
MNPPALDAFA GYGVELEYMV VARDTLAVLP IADRLLASAA GRAASAVVRG GFGWCNEIVL 
HLVEIKNQAP APALAPLAAG FQAEVAAIGQ FLQPLGARLM PTGMHPWMDP RRETRLWADD
PAGIYRAYDR IFDCHSHGQA NLQSMQLNLP FADDTQFARL HAAIRLVLPI LPAIAASSPL
ADGRPAAHLD ARMAAYAGAV ARVPAVIGEL VPDTATGRAD YVEQVLAPMY RAIAPLDPDG
VLQHEWLNAR GAIPRFERDA IEIRVVDMQE CPAADLAIAA ATAAAVRALY DATWSSLSEQ
QAIATPVLTR LMHACVRYGD AALIDDGPYL RLLGLPAHPV AAAEVWQHLI ETTGVGRAAP
WREPLQCMQQ QGPLARRILR ALGADATRQR QHAVYEALCD CLDAGRMFTP