Gene Tbd_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1425 
Symbol 
ID3672266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1515114 
End bp1515539 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content68% 
IMG OID637710110 
Productprotein tyrosine phosphatase 
Protein accessionYP_315183 
Protein GI74317443 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.694751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC CCCTGACCGT GCTGGTGCTG TGCACCGGCA ACTCCTGCCG CTCGCAAATG 
GCCGAGGTGC TGCTCAACCA TGACCTCGCG GGCCAGGTGC GCGCACTCTC CGCCGGCACC
CGGCCGCAAC CGAAGGTCGC GGACGGGGCG ATCGCGGCGC TGCAAGCGGC CGGACTGAAT
ACCGACGGTC TCCATCCGAA GGACGTCGAT GCGGTGATGC ACGAGGACAT CGACCTCGTC
GTGACCGTGT GCGACAACGC GAAGGAGGCC TGCCCGATCT TTCCCAAGCC GATTCCGGCG
ATCCATCTTC CCTTCCATGA CCCGCACGGC GAACCGCTCG AGAGCTTCAT CGCCGTACGC
GACGACATCC GCACGCGCCT CGTCGCGGCG GTGCGCGAGA AACTCGGCCT CGCGGCCGCG
GCCTGA
 
Protein sequence
MTKPLTVLVL CTGNSCRSQM AEVLLNHDLA GQVRALSAGT RPQPKVADGA IAALQAAGLN 
TDGLHPKDVD AVMHEDIDLV VTVCDNAKEA CPIFPKPIPA IHLPFHDPHG EPLESFIAVR
DDIRTRLVAA VREKLGLAAA A