Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1398 |
Symbol | |
ID | 3672499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1478065 |
End bp | 1478550 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637710083 |
Product | putative cytochrome c-type protein |
Protein accession | YP_315156 |
Protein GI | 74317416 |
COG category | [C] Energy production and conversion |
COG ID | [COG3245] Cytochrome c5 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0906233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATGA CCTCGCTTGC ACTCGCCTTG TCTTTGGCGG CCTTGCTCAG CGCTTGCGGC GACAAGGAAG CAGAGACCCC GGAAACGGCA GCGCCTGAAA TGAGCGCACC GGCGCCCGAG GCCGCCGCAC CCGAAGCAGC GGCACCTGAG GCAGCCGCAC CGGAGGCCGC GCCTGCGCCG GAGGCTGCCG CCCCCGCCGC TCCGGCCGAA GGTGAGGCAG TCGCCGCGGC AGGCGACGTC GGCAAGAAGG TCTACGGCAA CGTGTGCTCG ATGTGCCACG CTGCAGGCGT GGCCGGCGCG CCGAAGCCGG GCGACAAGGC CGAGTGGGGC CCCCGCATCG CCCAGGGCAA CGACGTGCTC TACAAGCACG CGATCGAAGG CTTCACCGGC AAGAAAGGCA TGATGCCCGC GCGCGGCGGC TCGACGACGC TGTCGGACGA CGAAGTCAAG GCTGCAGTCG ACTTCATGGT TGCGCAGTCG AAGTAA
|
Protein sequence | MKMTSLALAL SLAALLSACG DKEAETPETA APEMSAPAPE AAAPEAAAPE AAAPEAAPAP EAAAPAAPAE GEAVAAAGDV GKKVYGNVCS MCHAAGVAGA PKPGDKAEWG PRIAQGNDVL YKHAIEGFTG KKGMMPARGG STTLSDDEVK AAVDFMVAQS K
|
| |