Gene Tbd_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1398 
Symbol 
ID3672499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1478065 
End bp1478550 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content69% 
IMG OID637710083 
Productputative cytochrome c-type protein 
Protein accessionYP_315156 
Protein GI74317416 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0906233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGA CCTCGCTTGC ACTCGCCTTG TCTTTGGCGG CCTTGCTCAG CGCTTGCGGC 
GACAAGGAAG CAGAGACCCC GGAAACGGCA GCGCCTGAAA TGAGCGCACC GGCGCCCGAG
GCCGCCGCAC CCGAAGCAGC GGCACCTGAG GCAGCCGCAC CGGAGGCCGC GCCTGCGCCG
GAGGCTGCCG CCCCCGCCGC TCCGGCCGAA GGTGAGGCAG TCGCCGCGGC AGGCGACGTC
GGCAAGAAGG TCTACGGCAA CGTGTGCTCG ATGTGCCACG CTGCAGGCGT GGCCGGCGCG
CCGAAGCCGG GCGACAAGGC CGAGTGGGGC CCCCGCATCG CCCAGGGCAA CGACGTGCTC
TACAAGCACG CGATCGAAGG CTTCACCGGC AAGAAAGGCA TGATGCCCGC GCGCGGCGGC
TCGACGACGC TGTCGGACGA CGAAGTCAAG GCTGCAGTCG ACTTCATGGT TGCGCAGTCG
AAGTAA
 
Protein sequence
MKMTSLALAL SLAALLSACG DKEAETPETA APEMSAPAPE AAAPEAAAPE AAAPEAAPAP 
EAAAPAAPAE GEAVAAAGDV GKKVYGNVCS MCHAAGVAGA PKPGDKAEWG PRIAQGNDVL
YKHAIEGFTG KKGMMPARGG STTLSDDEVK AAVDFMVAQS K