Gene Tbd_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1397 
Symbol 
ID3672498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1477372 
End bp1477971 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content70% 
IMG OID637710082 
Producthypothetical protein 
Protein accessionYP_315155 
Protein GI74317415 
COG category[C] Energy production and conversion 
COG ID[COG4314] Predicted lipoprotein involved in nitrous oxide reduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.123154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGGG CGACGAAACT GGCGCTGGCC GCGACCGTGG CGGCGCTTTC GGCGGCGGCC 
GTCGTCGTGT TCCCGACGGG CGGCGCGAAA CCGGTCCCGC CGGAGGTGGA CAACGACTTC
TGCGTGGTCG CGCCGGCGAC ACCCTACGAA GCCGCGTCGG GCCTGCCGAT GCTCGCGCCC
AAGACCGTTC CCGATGATGC GCGCTGCCCG GTCTGCGGCA TGTACCCAGC CCGTTTCCCC
CACTGGGCGG CGCAAGTCGT TTTCCGCGAC GGCGCCTCGC AGTTCTTCGA TTCGCCGGTC
GACCTGCTGG TCTTCCTCGC GCGTATCGAA CGCTACAACC CGAGCTACGC GGCCGCCGAC
GTCGCGGGCC GCTTCGTCAC GGATGCCAAG ACCGGGAAGT GGACCGCGCT CGAGCAGGCC
TACTTCGTCC ACGGCTCGAA CGCGCTCGGG CCGATGCGCG ACGGTGACCT GCCTGCCTTC
GCCAGCCGCA GCGAGGCTGA ACGCTTCGCC GCGAAAAACG GCGGGCGCGT GCGCAAACAC
TCCGAGATCA CCGCGGCCGA GCTGGGTGTG CTGAGCCGCA ACCGACGGCA TCACCACTAG
 
Protein sequence
MRGATKLALA ATVAALSAAA VVVFPTGGAK PVPPEVDNDF CVVAPATPYE AASGLPMLAP 
KTVPDDARCP VCGMYPARFP HWAAQVVFRD GASQFFDSPV DLLVFLARIE RYNPSYAAAD
VAGRFVTDAK TGKWTALEQA YFVHGSNALG PMRDGDLPAF ASRSEAERFA AKNGGRVRKH
SEITAAELGV LSRNRRHHH