| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1384 |
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| Symbol | |
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| ID | 3672485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1462285 |
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| End bp | 1463382 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637710069 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_315142 |
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| Protein GI | 74317402 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.628545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAAG CACGGATCTG GCTCGAGAAA GTCCACGCGC TCGCGTTCGA CCGCAAGGTC
AAGATCATGA ACGTATGCGG CGGGCACGAG CGCTCGATCA CCCATGCCGG ACTGCGCGGC
GCGCTGCCGG ACTGGCTCGA GCTCGTGCCC GGACCCGGCT GCCCGGTCTG CGTGTGCCCC
GAAGAAGACG TCTACCAGGC GATCCAGCTC GCGCTGCAGG ACAGGGTCAT TCTCGTCGCC
TACGGCGACA TGCTGCGGGT ACCGGTCAAC GTCAAGAAAG GCGAAATTCG ATCACTGGCC
GAGGCGCAGG CCGCGGGGGC GGACGTGCGG CCGATCGCGA GCCCGCTCGA CGCCCGCAGG
ATCGCAGCCG AAAACCCGAC GCGGCCCGTG GTGTTCTTCG CCGCGGGCTT CGAAACGACG
ACCGCGCCGA CCGCCGCCAT GCTGGCCGAA GGCGTTCCCG ACAATCTGAG CATTCTGCTG
TCCGGGCGCC TGACCTGGCC CGCGGTCGCG ATGCTGCTCG ACTCGGGCAG CCCCGGCTTC
GACGCGCTGA TCGCCCCCGG CCACGTGTCG ACCGTGATGG GGCCCGAGGA ATGGAACTTC
GTCGTCCAAC GCCACGAGAT CCCCGCCGCG GTCGCCGGGT TCGGCACGGC CTCGCTGCTC
GCCTCCTTCT ATTCGGTGCT GCGCCAGCTC GAGAGCGGTG AACGCTTTCT CGACAACTGC
TACCGCGAAG TCGCGCACCC GGACGGGAAT CCAACGGCGC GTCGAATGAT GGCCCGCGCG
TTCGACGTGG TCGACGCGAA CTGGCGCGGC ATCGGCGTGA TCGCTCGCTC GGGATACGCA
CTCAAACCGG GCCTCGCGCA GCACGACGCA CGCGTCCTGT TCGACGACCA CACCGATCCG
GCGCGCTGGC GCGCCGGCGA AATGCCGCCC GGATGCGACT GCGCGCAAGT CGTTCTCGGC
AAGATCTATC CCAACCAGTG CCGCATCTAC GGCAAGGCCT GCACGCCGCG CAAGCCGGTG
GGACCGTGCA TGGTCTCGGA CGAAGGCGCC TGCCGCATCT GGTGGGCCGG TGGCGTGCGC
GTCGCGGCCG ATGCCTGA
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| Protein sequence | MDEARIWLEK VHALAFDRKV KIMNVCGGHE RSITHAGLRG ALPDWLELVP GPGCPVCVCP
EEDVYQAIQL ALQDRVILVA YGDMLRVPVN VKKGEIRSLA EAQAAGADVR PIASPLDARR
IAAENPTRPV VFFAAGFETT TAPTAAMLAE GVPDNLSILL SGRLTWPAVA MLLDSGSPGF
DALIAPGHVS TVMGPEEWNF VVQRHEIPAA VAGFGTASLL ASFYSVLRQL ESGERFLDNC
YREVAHPDGN PTARRMMARA FDVVDANWRG IGVIARSGYA LKPGLAQHDA RVLFDDHTDP
ARWRAGEMPP GCDCAQVVLG KIYPNQCRIY GKACTPRKPV GPCMVSDEGA CRIWWAGGVR
VAADA
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