Gene Tbd_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1313 
Symbol 
ID3671885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1393951 
End bp1394586 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID637709998 
Producthypothetical protein 
Protein accessionYP_315071 
Protein GI74317331 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCT CTCGGGAGAC CGCGATGCAA CCCTGTTCCT TGGCCTTGAA TTCCCTGCGT 
GCACTCTGGT TGATGACGCT ACTGATATTC GCCGGAGCGG CTGTTGCAGC CGGTCCCGCG
GCCGAAAAGA AGGCGGCGAA ATTTGAAATC GACTACATGA CCGGAATGAT CAGCCATCAC
CAGATGGCCG TGCACATGGG AACGATGTGC GTGCAGAAGG CCGAGCACGA GGAATTGCGC
GCGATGTGCG ACCAGATCAT CGCGGCGCAG ACCGCGGAAA TCGCGACGCT GATGGGCTGG
CTGCAAGCCT GGTATGGCAG CGGTGTGGAA CCGAAGATGT CGGGCAAGGA TCAGCGCGAG
ATGGAGAAGC TCGAGGCGCT GAGCGGCGCC GAATTCGAGA TCGAGTTCAT GAAATCCATG
ATCCGGCATC ACTTCACAGC GATCGTCGTG AGCAGCGAAT GCCTGCTGGA CGCCGACCAC
CCGGCGCTCA TCGCCATGTG TCAGGACATC ATCACCGCGC AAGCGGCCGA GATTCGTCAG
CTGCGCAACT GGCTATGCGA GTGGTACGGC ATCTGCAGCT ACCGCGCGCG CAGCGAGGAA
ATCCGCGAAG AGACGCGTAC GCGCCGGCCT GAGTAA
 
Protein sequence
MRISRETAMQ PCSLALNSLR ALWLMTLLIF AGAAVAAGPA AEKKAAKFEI DYMTGMISHH 
QMAVHMGTMC VQKAEHEELR AMCDQIIAAQ TAEIATLMGW LQAWYGSGVE PKMSGKDQRE
MEKLEALSGA EFEIEFMKSM IRHHFTAIVV SSECLLDADH PALIAMCQDI ITAQAAEIRQ
LRNWLCEWYG ICSYRARSEE IREETRTRRP E