Gene Tbd_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1278 
Symbol 
ID3673368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1344181 
End bp1345056 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content71% 
IMG OID637709963 
Producthypothetical protein 
Protein accessionYP_315036 
Protein GI74317296 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.633716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCG ATTCCGTCGC CGAGCCGCTT CCCAACACCT TCGCCCTGCA CGAAGGCGAG 
TTGATCGCGC TGCAGGTGCG CGCCGCCCAG GCCTTCTCGC TGCCCGACGT CGTCTTCAGC
GATGCGCTGC GCGCCGGCGG CAGCGGCCCG CTGCTCGCGA CGATTCCGGC GGGCGCCTTC
GAATACGGCG CCGCGACCGA CGAGGCCGCG CCCGCCCACG AGCGGCCGCG TCGCGCGGCC
TTGATCGAGC GCAGTTTTGC CCTGGGCGTC TGCCCCGTCA CCACCGAGGA ATTCGAAGCC
TTCGCGCACG CGACCGGGTG GCGGCCGCGC GCCGAGCTGG TCTGGCTTTC CGGTCGCAAG
CCCGCGATCA ACGTACGTCA GACCGATGCA CGCGACTACT GCGCATGGCT GTCCGAGCAG
TCGGGACAGC GCTATCGCCT GCCCACCGAG CAGGAGTGGG AGTACGCCTG CCGCGCCGGC
GCCGCGAGCG CCTACCCCTG CGGCAACTGC ATCACCGCTT CGCAGGCGCG CTACAACACG
CGTGGCGGCT TCGACGCCAT TCACCCGCGG CGCCCCTATC TGCTGGCGCG CCGTTTCATC
GGCCGCGGTG CGACCGAGGT CGGCCGGAAC GCGCCCAATC GCTGGGGTCT GCACGACATG
CCCGGCAACG TCTGGGAGTT CACGGCGAGC CCCTGGACCG AGAGCCATAG CCGTCTGCCC
GAGCGGCCGG CGCAGGGCAA ACCGCAGGCC ATCGTCACCA AGGGCGGCTC CTGGTTCGAC
GGCCCCGAGG ATTGCCGTGC CGCCGCACGC AGGCGGCGCC TCGAAGACGA ACTCGACATC
AATCTCGGCT TTCGTGTCCT GCGCGAACTC GCGTAA
 
Protein sequence
MNLDSVAEPL PNTFALHEGE LIALQVRAAQ AFSLPDVVFS DALRAGGSGP LLATIPAGAF 
EYGAATDEAA PAHERPRRAA LIERSFALGV CPVTTEEFEA FAHATGWRPR AELVWLSGRK
PAINVRQTDA RDYCAWLSEQ SGQRYRLPTE QEWEYACRAG AASAYPCGNC ITASQARYNT
RGGFDAIHPR RPYLLARRFI GRGATEVGRN APNRWGLHDM PGNVWEFTAS PWTESHSRLP
ERPAQGKPQA IVTKGGSWFD GPEDCRAAAR RRRLEDELDI NLGFRVLREL A