| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1277 |
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| Symbol | |
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| ID | 3673367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1343320 |
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| End bp | 1344045 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637709962 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_315035 |
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| Protein GI | 74317295 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACTGGA CGCGACGCAT CCTGCGTTGC GCCGTACTGC ACACGACGCC CGACGACGAC
GTGATCGACC CACAGGCGCA TGCGCTGTGC CGCTTCGGTG GCTGGCTCGC GCACCATCAC
AAGCATCTCG AGTCGCTCGA CGCGGCCGCC GCCGACCGTG TCGACGTCGC GCACCGCGCG
ATGCACGACG CAATGCGGGC GATCTGCCTG TGCATCGTCC GCGGGGAGGC CGCGCCGGCC
GAGGAACTCG ACGCCTTCGA GCAATCGCAG GAGGCGCTCA TTCAGCTGCT GGCGACGTTC
AAGACCCTGA TCCTGTCCAA GGCCGGGCGT CGCGATCCGC TGACGCAACT GCCGATGCGT
CACAACATCG AAAGCGACTA TCTCCTCTAC CAGAAGGAAG CGCGACGCAA GCGAAGCGCG
CTCTACGTCG CGATGATTGA CGTCGACCAT TTCAAGCCGA TCAACGATAC CTATGGCCAT
CCCGCCGGCG ACCGGGTCCT GCGCCACGTC GCGGAGACCT TGAAGCGGAC GCTGCGCAGC
GACGAGCCGC TCTATCGCTA CGGCGGCGAA GAGTTTCTCT GGCTGCTGAA GTGCAACTCG
CCCGACGAGG CCGGGCGCTC GGCGCAACGC GTGCTGGAGA CCGTCGCGAC GACGCCGGTG
CCGGTCGACG ACGCGGCGAC CTCGCGCTGT ACGAGGGCAA GCGCCGCGGC CGCAACCGCT
ACGTGA
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| Protein sequence | MDWTRRILRC AVLHTTPDDD VIDPQAHALC RFGGWLAHHH KHLESLDAAA ADRVDVAHRA
MHDAMRAICL CIVRGEAAPA EELDAFEQSQ EALIQLLATF KTLILSKAGR RDPLTQLPMR
HNIESDYLLY QKEARRKRSA LYVAMIDVDH FKPINDTYGH PAGDRVLRHV AETLKRTLRS
DEPLYRYGGE EFLWLLKCNS PDEAGRSAQR VLETVATTPV PVDDAATSRC TRASAAAATA
T
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